Sponsored Content
Top Forums UNIX for Dummies Questions & Answers Is there any $PATH default setting? Post 302699477 by alister on Tuesday 11th of September 2012 07:58:44 PM
Old 09-11-2012
Directories in PATH are searched in the order they appear. If you want your bin directory to take precedence, it has to occur ahead of the directory containing the conflicting executable.

Alternatively, if the issue is only with this one binary, you could create an alias with an absolute path and leave PATH unmodified:
Code:
alias blastn=/home/yifangt/download-software/bin/blastn


Regards,
Alister
This User Gave Thanks to alister For This Post:
 

9 More Discussions You Might Find Interesting

1. UNIX for Dummies Questions & Answers

Setting $PATH for a particular file...????

:) dear members; I am trying to placea directory to keep minor records in particular directories.. rather than just rely on hard links.. I would like to set the $PATH variable so that I can access the directory itself from anywhere; ex./ /tmp or /bin /var... I know how to export enviromental... (4 Replies)
Discussion started by: moxxx68
4 Replies

2. UNIX for Dummies Questions & Answers

Help on setting path variable

Hi there, I need help on setting the path variable. How can I set the path variable with Bourne Shell. My scripts goes like this, but did not work. #!/bin/sh PATH=/usr/bin:/usr/ucb:/etc:/export/home/zchen/home export PATH Thanks, Z (4 Replies)
Discussion started by: randomcz
4 Replies

3. Shell Programming and Scripting

Setting path

Hi all, I have a java command in a shell script. When i m executing the command from the prompt its working fine. But when i paste the same command in a shell script and execute the shell script it says path not found. Please help. (5 Replies)
Discussion started by: radhika03
5 Replies

4. Solaris

Problem Setting $PATH

I am trying to install the pkg-get package to a fresh install of Solaris 10. I am able to download and install correctly using the default directory for both pkg-get and wget as found on blastwave.org. When I issue the command "which wget and which pkg-get" it returns no wget or pkg-get found in... (1 Reply)
Discussion started by: greengrass
1 Replies

5. Shell Programming and Scripting

Setting up a path in UNIX

I have the following script "test". When i tried to execute it, I am not able to run it. I dunno why ? Then i tried getting the first few lines of the script which is displayed below: $head -10 test #!/bin/ksh PROG=$0;export PROG ORAUSER=`get_inf_env INFORM_DB_ACCOUNT`;export ORAUSER... (13 Replies)
Discussion started by: bobby1015
13 Replies

6. Solaris

Setting PATH - Vanishes

Hi , I new to solaris. I want to set path variable . Eg: JAVA_HOME. When i do this, #JAVA_HOME=/usr/jdk/jdk1.6 #export JAVA_HOME #echo $JAVA_HOME /usr/jdk/jdk1.6 Then its ok. When i toggle to bourne shell or if i log off or restart. then JAVA_HOME is echoed blank. How to set... (4 Replies)
Discussion started by: gnanagurus
4 Replies

7. Shell Programming and Scripting

Setting path names

I am in a directory called /abstracts Doing tree -d gives . ├── geo1936 │ ├── geo01n01 │ ├── geo01n02 │ └── geo01n03 ├── geo1937 │ ├── geo02n01 │ ├── geo02n02 │ ├── geo02n03 │ └── geo02n04 (4 Replies)
Discussion started by: kristinu
4 Replies

8. UNIX for Dummies Questions & Answers

Setting up a private path

Hi all, This is probably a very simple question but I couldn't even think of how to phrase it intelligently so google could tell me the answer. Basically I am a user on a server, I am not the admin and do not have root privileges. I have downloaded a bunch of programs that I need to use and... (2 Replies)
Discussion started by: DavyK1984
2 Replies

9. Shell Programming and Scripting

Setting class path

hi , can anybody help me to chage the class path in unix server.. what are the files need to update .... (2 Replies)
Discussion started by: Madhu Siddula
2 Replies
WHICH(1)						      General Commands Manual							  WHICH(1)

NAME
which - shows the full path of (shell) commands. SYNOPSIS
which [options] [--] programname [...] DESCRIPTION
Which takes one or more arguments. For each of its arguments it prints to stdout the full path of the executables that would have been exe- cuted when this argument had been entered at the shell prompt. It does this by searching for an executable or script in the directories listed in the environment variable PATH using the same algorithm as bash(1). This man page is generated from the file which.texinfo. OPTIONS
--all, -a Print all matching executables in PATH, not just the first. --read-alias, -i Read aliases from stdin, reporting matching ones on stdout. This is useful in combination with using an alias for which itself. For example alias which='alias | which -i'. --skip-alias Ignore option `--read-alias', if any. This is useful to explicity search for normal binaries, while using the `--read-alias' option in an alias or function for which. --read-functions Read shell function definitions from stdin, reporting matching ones on stdout. This is useful in combination with using a shell func- tion for which itself. For example: which() { declare -f | which --read-functions $@ } export -f which --skip-functions Ignore option `--read-functions', if any. This is useful to explicity search for normal binaries, while using the `--read-functions' option in an alias or function for which. --skip-dot Skip directories in PATH that start with a dot. --skip-tilde Skip directories in PATH that start with a tilde and executables which reside in the HOME directory. --show-dot If a directory in PATH starts with a dot and a matching executable was found for that path, then print "./programname" rather than the full path. --show-tilde Output a tilde when a directory matches the HOME directory. This option is ignored when which is invoked as root. --tty-only Stop processing options on the right if not on tty. --version,-v,-V Print version information on standard output then exit successfully. --help Print usage information on standard output then exit successfully. RETURN VALUE
Which returns the number of failed arguments, or -1 when no `programname' was given. EXAMPLE
The recommended way to use this utility is by adding an alias (C shell) or shell function (Bourne shell) for which like the following: [ba]sh: which () { (alias; declare -f) | /usr/bin/which --tty-only --read-alias --read-functions --show-tilde --show-dot $@ } export -f which [t]csh: alias which 'alias | /usr/bin/which --tty-only --read-alias --show-dot --show-tilde' This will print the readable ~/ and ./ when starting which from your prompt, while still printing the full path when used from a script: > which q2 ~/bin/q2 > echo `which q2` /home/carlo/bin/q2 BUGS
The HOME directory is determined by looking for the HOME environment variable, which aborts when this variable doesn't exist. Which will consider two equivalent directories to be different when one of them contains a path with a symbolic link. AUTHOR
Carlo Wood <carlo@gnu.org> SEE ALSO
bash(1) WHICH(1)
All times are GMT -4. The time now is 04:35 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy