Hi,
How we can use use plink to access unix system using Dos.
Could someone send me the commands that can be use in Batch file to call unix system using plink utility.
Thanks in advance (0 Replies)
This is my shell script... test.sh
DIRECTORY=/XYZ/PQR
if ; then
echo "In test.."
else
echo "lno.."
fi
when i run this script through a putty its output is:
./test.sh: line 2: [: too many arguments
lno..
But when i run the same script using plink its running fine and its... (5 Replies)
Hello. I have a TCL script that logs in to a server using SSH. As SSH isn't available in windows,I used Plink to do the job.The script works fine on my PC and 2 of my friend's PC.
However, on one PC, I get the following error message:
"'D:\scripts\plink.exe' is not a Win32 Console... (1 Reply)
Im trying
C:\Program Files\PUTTY\plink.exe mysite.net -l username -pw mypassword -m restart.sh
But the login / password are never sent. If I remove the -m restart.sh it will login
I need the command inside restart.sh issued after the login password is completed.
THanks (6 Replies)
Hi,
I'm testing out this plink script - which will be executed to shutdown multiple LPARs.
This consists from:
plink -i /path/ssh/cert/ root@host shutdown -F
plink -i /path/ssh/cert/ root@host2 shutdown -F
The commands gets executed, however it stops on one host, and does not move... (6 Replies)
I'm using plink.exe on WinXP to run some commands on Z/OS BASH. My commands are interspersed with echo commands so that I can parse the output and work out what is where.
The first hundred or so commands run fine, but then one of them gets truncated. For example:
Input:
echo :end_logdetail:... (6 Replies)
Hi All,
Iam a newbie to the plink and need your assistance. I have referred some posts but it doesn't helps me much.
I have two steps to do.
1. I have a config file which has a list of servers,username and password.
2. I have a shell script in windows which accepts arguments and need to... (0 Replies)
I have similar issue as mentioned in
167174-how-run-script-using-batch-file.html
It works good, but the control is not coming back to source i tried adding exit to remote script.
Thanks,
Suresh (0 Replies)
Hi,
I have run into a problem to which i can't seem to find any solution, posting here is my last resort.
Problem:
I am using plink to access my router and run a few configuration commands. When in enter configurations mode, instead of sending next command plink keeps on waiting for manual... (7 Replies)
Hi,
I am executing below command from Windows run and it is not working
"C:\Program Files (x86)\PuTTY\pageant.exe" "D:\abc_key.ppk" -c "C:\Program Files (x86)\PuTTY\plink.exe" -ssh 172.19.11.134 sh ~/touchfile.sh
I have created a .ppk file in the directory specified
The plink window... (2 Replies)
Discussion started by: NP1
2 Replies
LEARN ABOUT DEBIAN
bio::featureio::bed
Bio::FeatureIO::bed(3pm) User Contributed Perl Documentation Bio::FeatureIO::bed(3pm)NAME
Bio::FeatureIO::bed - read/write features from UCSC BED format
SYNOPSIS
my $in = Bio::FeatureIO(-format => 'bed', -file => 'file.bed');
for my $feat ($in->next_feature) {
# do something with $feat (a Bio::SeqFeature::Annotated object)
}
my $out = Bio::FeatureIO(-format=>'bed');
for my $feat ($seq->get_seqFeatures) {
$out->write_feature($feat);
}
DESCRIPTION
See <http://www.genome.ucsc.edu/goldenPath/help/customTrack.html#BED>.
Currently for read and write only the first 6 fields (chr, start, end, name, score, strand) are supported.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Allen Day
Email allenday@ucla.edu
CONTRIBUTORS
Sendu Bala, bix@sendu.me.uk
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
_initialize
Title : _initialize
Function: initializes BED for reading/writing
Args : all optional:
name description
----------------------------------------------------------
-name the name for the BED track, stored in header
name defaults to localtime()
-description the description for the BED track, stored in
header. defaults to localtime().
-use_score whether or not the score attribute of
features should be used when rendering them.
the higher the score the darker the color.
defaults to 0 (false)
use_score
Title : use_score
Usage : $obj->use_score($newval)
Function: should score be used to adjust feature color when rendering? set to true if so.
Example :
Returns : value of use_score (a scalar)
Args : on set, new value (a scalar or undef, optional)
name
Title : name
Usage : $obj->name($newval)
Function: name of BED track
Example :
Returns : value of name (a scalar)
Args : on set, new value (a scalar or undef, optional)
description
Title : description
Usage : $obj->description($newval)
Function: description of BED track
Example :
Returns : value of description (a scalar)
Args : on set, new value (a scalar or undef, optional)
perl v5.14.2 2012-03-02 Bio::FeatureIO::bed(3pm)