I am using an application called "bigWigToBedGraph"
It has to be used like this in a folder contained the app and the fils:
Now, I have many files which I put them in one directory. They are all bigWig files. I wanna convert them to bedGraph. But I don't want to write the command line 100 times for all of them!!
Is there any way to convert them all at once and keep their names but just change the extensions?
Hello,
I am working with about 500,000 text files and 90% of them are duplicates. I need a way to delete the duplicate ones.
The files are email messages with the following file name examples:
20040129-1457 This is the Subject line.txt
20040129-1457 This is the Subject line-1.txt... (3 Replies)
I have a script that runs on one file (at a time).
like this:
$> perl myscript.pl filename > output
How can I run it on >6000 files and have the output sent out into slightly modified file name
$> perl myscript 6000files> output6000files.new extension
Thanks in anticipation (4 Replies)
Hello Everyone,
I have strange situation and unable to think of a solution. Situation is as follow,
FolderA contrain following files,
File1
File2
File3
File4
I want to compare as follow
compare File1 with File2 --> Result Same/Diffrent
compare File1 with File3 --> Result... (1 Reply)
Hey guys. I know pratically 0 about Linux, so could anyone please give me instructions on how to accomplish this ?
The distro is RedHat 4.1.2 and i need to find and replace a multiple lines string in several php files across subdirectories.
So lets say im at root/dir1/dir2/ , when i execute... (12 Replies)
Hi,
Can somebody help me?
I am testing a demo with the given function
PATH525="/uscms/home/emily/READme/extra/data/"
TEMP=temp
FileName=DataFileName
CopyFiles() {
# PATHNAME="$paths" ... (9 Replies)
How can I run the following command on multiple files and print out the corresponding multiple files.
perl script.pl genome.gff 1.txt > 1.gff
However, there are multiples files of 1.txt, from 1----100.txt
Thank you so much.
No duplicate posting! Continue here. (0 Replies)
How can I Run one script on multiple files and print out multiple files.
FOR EXAMPLE
i want to run script.pl on 100 files named 1.txt ....100.txt under same directory and print out corresponding file 1.gff ....100.gff.THANKS (4 Replies)
I have 7 text files of varying sizes for each month of System Maintenance done during the 2013 calendar year (Jan. 134 jobs, Feb. 84 jobs, Apr. 594 jobs, May 158 jobs, July 69 jobs, Aug. 1 job, Oct. 102 jobs) and I have another text file which contains everything from those 7 files. Each of the... (8 Replies)
I have a script that I need to run on one file at a time. Unfortunately using for i in F* or cat F* is not possible. When I run the script using that, it jumbles the files and they are out of order. Here is the script:
gawk '{count++; keyword = $1}
END {
for (k in count)
{if (count == 2)... (18 Replies)
Hi,
In sftp script to get files, I have to rename all the files which I am picking. Rename command does not work here. Is there any way to do this?
I am using #!/bin/ksh
For eg: sftp user@host <<EOF
cd /path
get *.txt
rename *.txt *.txt.done
... (7 Replies)
Discussion started by: jhilmil
7 Replies
LEARN ABOUT REDHAT
rmf
RMF(1) [nmh-1.5] RMF(1)NAME
rmf - remove an nmh folder
SYNOPSIS
rmf [+folder] [-interactive | -nointeractive] [-version] [-help]
DESCRIPTION
Rmf removes all of the messages (files) within the specified (or default) folder, and then removes the folder (directory) itself.
If there are any files within the folder which are not a part of nmh, they will not be removed, and an error will be produced. If the
folder is given explicitly or the -nointeractive option is given, then the folder will be removed without confirmation. Otherwise, the
user will be asked for confirmation. If rmf can't find the current folder, for some reason, the folder to be removed defaults to `+inbox'
(unless overridden by user's profile entry "Inbox") with confirmation.
If the folder being removed is a subfolder, the parent folder will become the new current folder, and rmf will produce a message telling
the user this has happened. This provides an easy mechanism for selecting a set of messages, operating on the list, then removing the list
and returning to the current folder from which the list was extracted.
If rmf s used on a read-only folder, it will delete all the (private) sequences (i.e., "atr-seq-folder" entries) for this folder from your
context without affecting the folder itself.
Rmf irreversibly deletes messages that don't have other links, so use it with caution.
FILES
$HOME/.mh_profile The user profile
PROFILE COMPONENTS
Path: To determine the user's nmh directory
Current-Folder: To find the default current folder
Inbox: To find the default inbox
SEE ALSO rmm(1)DEFAULTS
`+folder' defaults to the current folder, usually with confirmation
`-interactive' if +folder' not given, `-nointeractive' otherwise
CONTEXT
Rmf will set the current folder to the parent folder if a subfolder is removed; or if the current folder is removed, it will make "inbox"
current. Otherwise, it doesn't change the current folder or message.
BUGS
Although intuitively one would suspect that rmf works recursively, it does not. Hence if you have a sub-folder within a folder, in order
to rmf the parent, you must first rmf each of the children.
MH.6.8 11 June 2012 RMF(1)