Hi gang.
I'm using a unix/mac system and i'm trying to sort a file (more than 1,000,000 lines).
chr1 100000965 100001001 -
chr1 100002155 100002191 +
chr1 100002165 100002201 +
chr1 100002525 100002561 -
chr1 10000364 ... (2 Replies)
Hi all,
in my csv file it'll look like this, and of course it may have more columns
US to UK;abc-hq-jcl;multimedia
UK to CN;def-ny-jkl;standard
DE to DM;abc-ab-klm;critical
FD to YM;la-yr-tym;standard
HY to MC;la-yr-ytm;multimedia
GT to KJ;def-ny-jrt;critical
I would like to group... (4 Replies)
I have a tab delimited file with 5 columns
79 A B 20.2340 6.1488 8.5086 1.3838
87 A B 0.1310 0.0382 0.0054 0.1413
88 A B 46.1651 99.0000 21.8107 0.2203
89 A B 0.1400 0.1132 0.0151 0.1334
114 A B 0.1088 0.0522 0.0057 0.1083
115 A B... (2 Replies)
Hi,
I have the following file, I need to sort it based on a column and write to different output files based on this column
request_guid iso_country_cd address_data response_time
32895901-d17f-414c-ac93-3e7e0f5ec240 AND BaseName:CATALUNYA; HouseNumber:1; ISOCountryCode:AND;... (1 Reply)
Hi team,
We have few files landing to our server based on sequence number. These files have to be processed in the sequence number order. Once the sequence number has reached its maximum, the files with sequence number 0000 has to be processed.
For example:
IN9997
IN9998
IN9999
IN0000... (7 Replies)
Hi,
I use UBUNTU 12.04.
I have a file with this structure:
Name 2 1245787 A G 12 14 12 14 ....
Name 1 1245789 C T 13 12 12 12.....
I would like to sort my file based on the second column so to have this output for example:
Name 1 1245789 C T 13 12 12 12.....
Name 2 1245787 A G 12 14... (4 Replies)
Hello,
I have two files as the following:
File1:
F0100020 A G
F0100030 A T
F0100040 A G
File2:
F0100040 A G BTA-28763-no-rs 77.2692
F0100030 A T BTA-29334-no-rs 11.4989
F0100020 A G BTA-29515-no-rs 127.006
I want to sort the second file based on the... (6 Replies)
hello,
I have a file as follows:
F0100010 A C F0100040 A G BTA-28763-no-rs 77.2692
F0100020 A G F0100030 A T BTA-29334-no-rs 11.4989
F0100030 A T F0100020 A G BTA-29515-no-rs 127.006
F0100040 A G F0100010 A C BTA-29644-no-rs 7.29827
F0100050 A... (9 Replies)
Hello, I was looking for a way to select between the repeated entries (column1) based on the values of absolute values of column 3 (larger value). For example if the same gene id has FC value -2 and 1, I should get the output as -2. Kindly help.
GeneID Description FC ... (2 Replies)
Hi All
I have a requirement to list all the files in chronological order based on the date value in the file name.For ex if I have three files as given below
ABC_TEST_20160103_1012.txt
ABC_TEST_20160229_1112.txt
ABC_TEST_20160229_1112.txt
I have written code as given below to list out... (2 Replies)
Discussion started by: ginrkf
2 Replies
LEARN ABOUT PHP
total
TOTAL(1) General Commands Manual TOTAL(1)NAME
total - sum up columns
SYNOPSIS
total [ -m ][ -sE | -p | -u | -l ][ -i{f|d}[N] ][ -o{f|d} ][ -tC ][ -N [ -r ]] [ file .. ]
DESCRIPTION
Total sums up columns of real numbers from one or more files and prints out the result on its standard output.
By default, total computes the straigt sum of each input column, but multiplication can be specified instead with the -p option. Likewise,
the -u option means find the upper limit (maximum), and -l means find the lower limit (minimum).
Sums of powers can be computed by giving an exponent with the -s option. (Note that there is no space between the -s and the exponent.)
This exponent can be any real number, positive or negative. The absolute value of the input is always taken before the power is computed
in order to avoid complex results. Thus, -s1 will produce a sum of absolute values. The default power (zero) is interpreted as a straight
sum without taking absolute values.
The -m option can be used to compute the mean rather than the total. For sums, the arithmetic mean is computed. For products, the geomet-
ric mean is computed. (A logarithmic sum of absolute values is used to avoid overflow, and zero values are silently ignored.)
If the input data is binary, the -id or -if option may be given for 64-bit double or 32-bit float values, respectively. Either option may
be followed immediately by an optional count, which defaults to 1, indicating the number of double or float binary values to read per
record on the input file. (There can be no space between the option and this count.) Similarly, the -od and -of options specify binary
double or float output, respectively. These options do not need a count, as this will be determined by the number of input channels.
A count can be given as the number of lines to read before computing a result. Normally, total reads each file to its end before producing
its result, but this behavior may be overridden by inserting blank lines in the input. For each blank input line, total produces a result
as if the end-of-file had been reached. If two blank lines immediately follow each other, total closes the file and proceeds to the next
one (after reporting the result). The -N option (where N is a decimal integer) tells total to produce a result and reset the calculation
after every N input lines. In addition, the -r option can be specified to override reinitialization and thus give a running total every N
lines (or every blank line). If the end of file is reached, the current total is printed and the calculation is reset before the next file
(with or without the -r option).
The -tC option can be used to specify the input and output tab character. The default tab character is TAB.
If no files are given, the standard input is read.
EXAMPLE
To compute the RMS value of colon-separated columns in a file:
total -t: -m -s2 input
To produce a running product of values from a file:
total -p -1 -r input
BUGS
If the input files have varying numbers of columns, mean values will certainly be off. Total will ignore missing column entries if the tab
separator is a non-white character, but cannot tell where a missing column should have been if the tab character is white.
AUTHOR
Greg Ward
SEE ALSO cnt(1), neaten(1), rcalc(1), rlam(1), tabfunc(1)RADIANCE 2/3/95 TOTAL(1)