Hi all,
I have a huge csv file with the following format of data,
Num SNPs, 549997
Total SNPs,555352
Num Samples, 157
SNP, SampleID, Allele1, Allele2
A001,AB1,A,A
A002,AB1,A,A
A003,AB1,A,A
...
...
...
I would like to write out a list of unique SNP (column 1). Could you... (3 Replies)
Hello experts,
I have a requirement where I have to implement two checks on a csv file:
1. Check to see if the value in first column is duplicate, if any value is duplicate script should exit.
2. Check to verify if the value at second column is between "yes" or "no", if it is anything else... (4 Replies)
How can I delete a column from a CSV file which has comma separated value with a string enclosed in double quotes and a comma in between? I have a file 44.csv with 4 lines including the header like the below format:
column1, column2, column3, column 4, column5, column6
12,455,"string with... (6 Replies)
Hi all,
I am new to shell script.I need your help to write a shell script.
I need to write a shell script to extract data from a .csv file where columns are ',' separated.
The file has 5 columns having values say column 1,column 2.....column 5 as below along with their valuesm.... (3 Replies)
I have a .CSV file with the below format:
"column 1","column 2","column 3","column 4","column 5","column 6","column 7","column 8","column 9","column 10
"12310","42324564756","a simple string with a , comma","string with or, without commas","string 1","USD","12","70%","08/01/2013",""... (2 Replies)
input.csv:
Field1,Field2,Field3,Field4,Field4
abc ,123 ,xyz ,000 ,pqr
mno ,123 ,dfr ,111 ,bbb
output:
Field2,Field4
123 ,000
123 ,111
how to fetch the values of Field4 where Field2='123'
I don't want to fetch the values based on column position. Instead want to... (10 Replies)
cat sample.csv
ID,Name,no
1,AAA,1
2,BBB,1
3,AAA,1
4,BBB,1
cut -d',' -f2 sample.csv | sort | uniq
this gives only the 2nd column values
Name
AAA
BBB
How to I get all the columns of CSV along with this? (1 Reply)
Input
1,ABCD,no
2,system,yes
3,ABCD,yes
4,XYZ,no
5,XYZ,yes
6,pc,noCode used to find duplicate with regard to 2nd column
awk 'NR == 1 {p=$2; next} p == $2 { print "Line" NR "$2 is duplicated"} {p=$2}' FS="," ./input.csv
Now is there a wise way to de-duplicate the entire line (remove... (4 Replies)
Discussion started by: deadyetagain
4 Replies
LEARN ABOUT DEBIAN
bb-csvinfo.cgi
BB-CSVINFO.CGI(1) General Commands Manual BB-CSVINFO.CGI(1)NAME
bb-csvinfo.cgi - CGI program to show host information from a CSV file
SYNOPSIS
bb-csvinfo.cgi
DESCRIPTION
bb-csvinfo.cgi is invoked as a CGI script via the bb-csvinfo.sh CGI wrapper. Based on the parameters it receives, it searches a comma-
separated file for the matching host, and presents the information found as a table.
bb-csvinfo.cgi is passed a QUERY_STRING environment variable with the following parameters:
key (string to search for, typically hostname)
column (columnnumber to search - default 0)
db (name of the CSV database file in $BBHOME/etc/, default hostinfo.csv)
delimiter (delimiter character for columns, default semi-colon)
CSV files are easily created from e.g. spreadsheets, by exporting them in CSV format. You should have one host per line, with the first
line containing the column headings. Despite their name, the default delimiter for CSV files is the semi-colon - if you need a different
delimiter, invoke bb-csvinfo.cgi with the "delimiter=<character>" in the query string.
Example usage
This example shows how you can use the bb-csvinfo CGI. It assumes you have a CSV-formatted file with information about the hosts stored as
$BBHOME/etc/hostinfo.csv, and the hostname is in the first column of the file.
Use with the bbgen --docurl
The --docurl option to bbgen(1) sets up all of the hostnames on your Xymon webpages to act as links to a CGI script. To invoke the
bb-csvinfo CGI script, run bbgen with the option
--docurl=/cgi-bin/bb-csvinfo.sh?db=hostinfo.csv&key=%s
SEE ALSO bb-hosts(5), hobbitserver.cfg(5), bbgen(1)Xymon Version 4.2.3: 4 Feb 2009 BB-CSVINFO.CGI(1)
06-25-2012
