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Top Forums Shell Programming and Scripting Please suggest alternative to grep Post 302652699 by binlib on Thursday 7th of June 2012 02:23:18 PM
Old 06-07-2012
Assuming both files are sorted, maybe you can use "join".
If all the 300 million numbers of file1 start with 372846 (if not, then multiple passes maybe), then you can treat them as integers (minus the prefix). This way you can store them as bitmaps and do look up of the numbers (check prefix first separately) from file2. The first chapter of Jon Bentley's book "programming pearl" talked exactly about this problem.
 

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COMM(1) 							   User Commands							   COMM(1)

NAME
comm - compare two sorted files line by line SYNOPSIS
comm [OPTION]... FILE1 FILE2 DESCRIPTION
Compare sorted files FILE1 and FILE2 line by line. When FILE1 or FILE2 (not both) is -, read standard input. With no options, produce three-column output. Column one contains lines unique to FILE1, column two contains lines unique to FILE2, and column three contains lines common to both files. -1 suppress column 1 (lines unique to FILE1) -2 suppress column 2 (lines unique to FILE2) -3 suppress column 3 (lines that appear in both files) --check-order check that the input is correctly sorted, even if all input lines are pairable --nocheck-order do not check that the input is correctly sorted --output-delimiter=STR separate columns with STR --total output a summary -z, --zero-terminated line delimiter is NUL, not newline --help display this help and exit --version output version information and exit Note, comparisons honor the rules specified by 'LC_COLLATE'. EXAMPLES
comm -12 file1 file2 Print only lines present in both file1 and file2. comm -3 file1 file2 Print lines in file1 not in file2, and vice versa. AUTHOR
Written by Richard M. Stallman and David MacKenzie. REPORTING BUGS
GNU coreutils online help: <http://www.gnu.org/software/coreutils/> Report comm translation bugs to <http://translationproject.org/team/> COPYRIGHT
Copyright (C) 2017 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>. This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. SEE ALSO
join(1), uniq(1) Full documentation at: <http://www.gnu.org/software/coreutils/comm> or available locally via: info '(coreutils) comm invocation' GNU coreutils 8.28 January 2018 COMM(1)
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