hi Gurus,
can anyone provide a awk command to get teh count of number of file sin a specific directory.
appreciate any kind of information..
thanks (11 Replies)
Using awk I have an index file which has been seperated into 5 fields. The first field contains file names. What I need to do is check to see if a file exists in my current directory that is not in the first field of my index file. If its not i print out a message.
Please help! (4 Replies)
Hello,
I am strugling from quite a some time to compare flat files with over 1 million records could anyone please help me.
I want to compare two pipe delimited flat files, file1 with file2 and output the unmatched rows from file2 in file3
Sample File1:
... (9 Replies)
Folks I need your help cuz I've a file with 100,000 records that need to be compared against a passwd file (300) and then create a third one with the data in the first one and the passwd from the second one set in it.
The format of the first file is:
host xxxxxx "" 0,0 Closed control00/... (4 Replies)
Hi All,
I am using the awk command to replace ',' by '\t' (tabs) in a csv file. I would like to apply this to all .csv files in a directory and create .txt files with the tabs.
How would I do this in a script?
I have the following script called "csvtabs":
awk 'BEGIN {
FS... (4 Replies)
hi.. I want to compare records present in 1 file with those in 3 other files and print those records of file 1 which are not present in any of the files. for eg -
file1 file2 file3 file4
1 1 5 7
2 2 6 9
3
4
5
6
7
8
9
... (3 Replies)
Hi Guys,
I wanted to compare a delimited file and positional file, for a particular key files and if it matches then append the positional file with some data.
Example:
Delimited File
--------------
Byer;Amy;NONE1;A5218257;E5218257
Byer;Amy;NONE1;A5218260;E5218260
Positional File... (3 Replies)
I want to compare two files, 1) Compare Each query result. 2) Compare Only first row of the Query output 3) Compare Time (3rd column), First file time is lesser than 2nd file then print the PO_NUM else do nothing.
File1:
C:\script>call transaction 1OPOP
C:\script>Select ID, PO_ID, TIME, DES... (3 Replies)
So I have this issue. I have 4 files. the first one is the master file who has all possible combinations:
file 1
- a
- b
- c
- d
- e
the other three have some of the letters and a number instead of - for example
file 2
34 a
5 c
file 3
10 b
12 ... (3 Replies)
Hello,
I have two text files, each with a single column,
file 1:
124152970
123899868
123476854
54258288
123117283
file 2:
124152970
123899868
54258288
123117283
122108330 (5 Replies)
Discussion started by: LMHmedchem
5 Replies
LEARN ABOUT DEBIAN
vcf-compare
VCF-COMPARE(1) User Commands VCF-COMPARE(1)NAME
vcf-compare - compare bgzipped and tabix indexed VCF files
SYNOPSIS
compare-vcf [OPTIONS] file1.vcf file2.vcf ...
DESCRIPTION
About: Compare bgzipped and tabix indexed VCF files. (E.g. bgzip file.vcf; tabix -p vcf file.vcf.gz)
OPTIONS -c, --chromosomes <list|file>
Same as -r, left for backward compatibility. Please do not use as it will be dropped in the future.
-d, --debug
Debugging information. Giving the option multiple times increases verbosity
-H, --cmp-haplotypes
Compare haplotypes, not only positions
-m, --name-mapping <list|file>
Use with -H when comparing files with differing column names. The argument to this options is a comma-separated list or one mapping
per line in a file. The names are colon separated and must appear in the same order as the files on the command line.
-R, --refseq <file>
Compare the actual sequence, not just positions. Use with -w to compare indels.
-r, --regions <list|file>
Process the given regions (comma-separated list or one region per line in a file).
-s, --samples <list>
Process only the listed samples. Excluding unwanted samples may increase performance considerably.
-w, --win <int>
In repetitive sequences, the same indel can be called at different positions. Consider records this far apart as matching (be it a
SNP or an indel).
-h, -?, --help
This help message.
vcf-compare 0.1.5 July 2011 VCF-COMPARE(1)