Sponsored Content
Top Forums Shell Programming and Scripting awk based script to find the average of all the columns in a data file Post 302640629 by ks_reddy on Tuesday 15th of May 2012 07:07:01 AM
Old 05-15-2012
Desired output provided below.

Hi Franklin,

I need the below output for the input data provided.
Code:
1,2.5,3.5,4.5
2,4,5,6
3,4,5,6
5,5.5,5.5,6.5

(or)

Code:
2.5,3.5,4.5
4,5,6
4,5,6
5.5,5.5,6.5

preferably the first one.

I am running my script currently like this.

Code:
for i in $(seq 0 12); do # As all my files are having $1 from 0 to 12

awk -F, -v var1="$i" '$1==var1' file | awk -F, -f 1.awk

done

where my 1.awk is

Code:
FNR==1 { nf=NF} {  for(i=1; i<=NF; i++)    arr[i]+=$i   fnr=FNR } END {   for( i=1; i<=nf; i++)    printf("%.2f%s", arr[i] / fnr, (i==nf) ? "\n" : FS) }

Though I am getting desired output, I want to avoid the "|" and merge both the statements into a single command.

Thanks
Sidda
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Awk based script to find the median of all individual columns in a data file

Hi All, I have some data like below. Step1,Param1,Param2,Param3 1,2,3,4 2,3,4,5 2,4,5,6 3,0,1,2 3,0,0,0 3,2,1,3 ........ so on Where I need to find the median(arithmetic) of each column from Param1...to..Param3 for each set of Step1 values. (Sort each specific column, if the... (5 Replies)
Discussion started by: ks_reddy
5 Replies

2. Shell Programming and Scripting

AWK script to split data and find average

Input: 2.58359023380340e+02 1.43758864405595e+02 -7.65700666212508e+00 1.06460208083228e+02 1.26185441783936e+02 -3.41389169427027e+01 -1.40393299309592e+02 -3.07758776849508e+01 1.45067703495838e+02 1.79405834959073e+02 5.06666234594205e+01 OUT 2.0105894389e+02 (average of... (8 Replies)
Discussion started by: chrisjorg
8 Replies

3. Shell Programming and Scripting

awk based script to ignore all columns from a file which contains character strings

Hello All, I have a .CSV file where I expect all numeric data in all the columns other than column headers. But sometimes I get the files (result of statistics computation by other persons) like below( sample data) SNO,Data1,Data2,Data3 1,2,3,4 2,3,4,SOME STRING 3,4,Inf,5 4,5,4,4 I... (9 Replies)
Discussion started by: ks_reddy
9 Replies

4. UNIX for Dummies Questions & Answers

Find the average based on similar names in the first column

I have a table, say this: name1 num1 num2 num3 num4 name2 num5 num6 num7 num8 name3 num1 num3 num4 num9 name2 num8 num9 num1 num2 name2 num4 num5 num6 num4 name4 num4 num5 num7 num8 name5 num1 num3 num9 num7 name5 num6 num8 num3 num4 I want a code that will sort my data according... (4 Replies)
Discussion started by: FelipeAd
4 Replies

5. Shell Programming and Scripting

awk script to split file into multiple files based on many columns

So I have a space delimited file that I'd like to split into multiple files based on multiple column values. This is what my data looks like 1bc9A02 1 10 1000 FTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNNGVFQSTDTCYVLSFAIIMLNTSLHNPNVKDKPTVERFIAMNRGINDGGDLPEELLRNLYESIKNEPFKIPELEHHHHHH 1ku1A02 1 10... (9 Replies)
Discussion started by: viored
9 Replies

6. Emergency UNIX and Linux Support

Average columns based on header name

Hi Friends, I have files with columns like this. This sample input below is partial. Please check below for main file link. Each file will have only two rows. ... (8 Replies)
Discussion started by: jacobs.smith
8 Replies

7. Shell Programming and Scripting

Average across multiple columns - awk

Hi forum members, I'm trying to get an average of multiple columns in a csv file using awk. A small example of my input data is as follows: cu,u3o8,au,ag -9,20,-9,3.6 0.005,30,-9,-9 0.005,50,10,3.44 0.021,-9,8,3.35 The following code seems to do most of what I want gawk -F","... (6 Replies)
Discussion started by: theflamingmoe
6 Replies

8. Shell Programming and Scripting

Find columns in a file based on header and print to new file

Hello, I have to fish out some specific columns from a file based on the header value. I have the list of columns I need in a different file. I thought I could read in the list of headers I need, # file with header names of required columns in required order headers_file=$2 # read contents... (11 Replies)
Discussion started by: LMHmedchem
11 Replies

9. Shell Programming and Scripting

awk script to find data in three file and perform replace operation

Have three files. Any other approach with regards to file concatenation or splitting, etc is appreciated If column55(billngtype) of file1 contains YMNC or YPBC then pick the value of column13(documentnumber). Now find this documentnumber in column1(Billdoc) of file2 and grep the corresponding... (4 Replies)
Discussion started by: as7951
4 Replies

10. UNIX for Advanced & Expert Users

Need Optimization shell/awk script to aggreagte (sum) for all the columns of Huge data file

Optimization shell/awk script to aggregate (sum) for all the columns of Huge data file File delimiter "|" Need to have Sum of all columns, with column number : aggregation (summation) for each column File not having the header Like below - Column 1 "Total Column 2 : "Total ... ...... (2 Replies)
Discussion started by: kartikirans
2 Replies
A2P(1)							 Perl Programmers Reference Guide						    A2P(1)

NAME
a2p - Awk to Perl translator SYNOPSIS
a2p [options] [filename] DESCRIPTION
A2p takes an awk script specified on the command line (or from standard input) and produces a comparable perl script on the standard output. OPTIONS Options include: -D<number> sets debugging flags. -F<character> tells a2p that this awk script is always invoked with this -F switch. -n<fieldlist> specifies the names of the input fields if input does not have to be split into an array. If you were translating an awk script that processes the password file, you might say: a2p -7 -nlogin.password.uid.gid.gcos.shell.home Any delimiter can be used to separate the field names. -<number> causes a2p to assume that input will always have that many fields. -o tells a2p to use old awk behavior. The only current differences are: o Old awk always has a line loop, even if there are no line actions, whereas new awk does not. o In old awk, sprintf is extremely greedy about its arguments. For example, given the statement print sprintf(some_args), extra_args; old awk considers extra_args to be arguments to "sprintf"; new awk considers them arguments to "print". "Considerations" A2p cannot do as good a job translating as a human would, but it usually does pretty well. There are some areas where you may want to examine the perl script produced and tweak it some. Here are some of them, in no particular order. There is an awk idiom of putting int() around a string expression to force numeric interpretation, even though the argument is always integer anyway. This is generally unneeded in perl, but a2p can't tell if the argument is always going to be integer, so it leaves it in. You may wish to remove it. Perl differentiates numeric comparison from string comparison. Awk has one operator for both that decides at run time which comparison to do. A2p does not try to do a complete job of awk emulation at this point. Instead it guesses which one you want. It's almost always right, but it can be spoofed. All such guesses are marked with the comment ""#???"". You should go through and check them. You might want to run at least once with the -w switch to perl, which will warn you if you use == where you should have used eq. Perl does not attempt to emulate the behavior of awk in which nonexistent array elements spring into existence simply by being referenced. If somehow you are relying on this mechanism to create null entries for a subsequent for...in, they won't be there in perl. If a2p makes a split line that assigns to a list of variables that looks like (Fld1, Fld2, Fld3...) you may want to rerun a2p using the -n option mentioned above. This will let you name the fields throughout the script. If it splits to an array instead, the script is probably referring to the number of fields somewhere. The exit statement in awk doesn't necessarily exit; it goes to the END block if there is one. Awk scripts that do contortions within the END block to bypass the block under such circumstances can be simplified by removing the conditional in the END block and just exiting directly from the perl script. Perl has two kinds of array, numerically-indexed and associative. Perl associative arrays are called "hashes". Awk arrays are usually translated to hashes, but if you happen to know that the index is always going to be numeric you could change the {...} to [...]. Iteration over a hash is done using the keys() function, but iteration over an array is NOT. You might need to modify any loop that iterates over such an array. Awk starts by assuming OFMT has the value %.6g. Perl starts by assuming its equivalent, $#, to have the value %.20g. You'll want to set $# explicitly if you use the default value of OFMT. Near the top of the line loop will be the split operation that is implicit in the awk script. There are times when you can move this down past some conditionals that test the entire record so that the split is not done as often. For aesthetic reasons you may wish to change index variables from being 1-based (awk style) to 0-based (Perl style). Be sure to change all operations the variable is involved in to match. Cute comments that say "# Here is a workaround because awk is dumb" are passed through unmodified. Awk scripts are often embedded in a shell script that pipes stuff into and out of awk. Often the shell script wrapper can be incorporated into the perl script, since perl can start up pipes into and out of itself, and can do other things that awk can't do by itself. Scripts that refer to the special variables RSTART and RLENGTH can often be simplified by referring to the variables $`, $& and $', as long as they are within the scope of the pattern match that sets them. The produced perl script may have subroutines defined to deal with awk's semantics regarding getline and print. Since a2p usually picks correctness over efficiency. it is almost always possible to rewrite such code to be more efficient by discarding the semantic sugar. For efficiency, you may wish to remove the keyword from any return statement that is the last statement executed in a subroutine. A2p catches the most common case, but doesn't analyze embedded blocks for subtler cases. ARGV[0] translates to $ARGV0, but ARGV[n] translates to $ARGV[$n-1]. A loop that tries to iterate over ARGV[0] won't find it. ENVIRONMENT
A2p uses no environment variables. AUTHOR
Larry Wall <larry@wall.org> FILES
SEE ALSO
perl The perl compiler/interpreter s2p sed to perl translator DIAGNOSTICS
BUGS
It would be possible to emulate awk's behavior in selecting string versus numeric operations at run time by inspection of the operands, but it would be gross and inefficient. Besides, a2p almost always guesses right. Storage for the awk syntax tree is currently static, and can run out. perl v5.16.2 2012-08-26 A2P(1)
All times are GMT -4. The time now is 07:09 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy