Help making simple perl or bash script to create a simple matrix
Hello all!
This is my first post and I'm very new to programming. I would like help creating a simple perl or bash script that I will be using in my work as a junior bioinformatician.
Essentially, I would like to take a tab-delimted or .csv text with 3 columns and write them to a "3D" matrix:
Can anyone direct me to a resource that explains scripting in simple terms?
I have visited many sites and browsed this forum and have yet to find simple explanations. (8 Replies)
Hi
I want to write a small script that will create folders named from `AAAA' all the way to `ZZZZ'.
That is:
`AAAA'
`AAAB'
`AAAC'
...
`AABA'
`AABB'
`AABC'
...
`ABAA'
`ABAB'
`ABAC'
...
`ABBA'
...
`ZZZZ' (4 Replies)
I have a local account for a unix server. The idle timeout for the account is around 10 mins. I have to login to the server multiple times during the day. Is there a way to increase the idle timeout or may be a script that I can run on background so it is not idle. Something like echo date every 9... (3 Replies)
I'm attempting to parse a file whose contents follow this format;
4:/eula.1028.txt:
8:/eula.1031.txt:
19:/eula.1033.txt:
23:/eula.1036.txt:
27:/eula.1040.txt:
31:/eula.1041.txt:
35:/eula.1042.txt:
39:/eula.2052.txt:
43:/eula.3082.txt:
The number of lines of the file... (4 Replies)
Guys I want to do this:
copy:
/var/router/system1/config/backup/install.put
/var/router/system2/config/backup/install.put
/var/router/system3/config/backup/install.put
/var/router/system4/config/backup/install.put
into:
/var/router/system1/config/install.dat... (22 Replies)
Dear all,
I have a directory named A and some subdirectories named B, C, D with .xml files. I want to use the following command to strip the file.
sed -re ':start s/<*>//g; /</ {N; b start}' file.xml > file.xml
At the same time, I want to remove the blank lines using
sed '/^$/d'
How can... (6 Replies)
This is the problem: Write a script that will make a backup of a file giving it a ‘.bak’ extension & verify that it works. I have tried a number of different scripts that haven't worked and I haven't seen anything really concise and to the point via google. For brevity's sake this is one of the... (4 Replies)
Hello,
Anyone please covert this in perl language
########################
if ps faux | grep -v grep | grep ProcessXYZ
then
echo "$SERVICE is running, , everything is fine"
exit 0
else
echo "$SERVICE is not running"
exit 2
fi
Additional... (1 Reply)
I am trying to make a 4x4 matrix and I would greatly appreciate any help.
I have 4 text files and I want to do the following. I want to concatenate them and gzip them. Then I want to find the file size of the concatenated file and subtract the value of file A. Finally, I want to output this final... (1 Reply)
Discussion started by: sdw8253
1 Replies
LEARN ABOUT DEBIAN
alien::package::rpm
Alien::Package::Rpm(3pm) User Contributed Perl Documentation Alien::Package::Rpm(3pm)NAME
Alien::Package::Rpm - an object that represents a rpm package
DESCRIPTION
This is an object class that represents a rpm package. It is derived from Alien::Package.
FIELDS
prefixes
Relocatable rpm packages have a prefixes field.
METHODS
checkfile
Detect rpm files by their extention.
install
Install a rpm. If RPMINSTALLOPT is set in the environement, the options in it are passed to rpm on its command line.
scan
Implement the scan method to read a rpm file.
unpack
Implement the unpack method to unpack a rpm file. This is a little nasty because it has to handle relocatable rpms and has to do a bit
of permissions fixing as well.
prep
Prepare for package building by generating the spec file.
cleantree
Delete the spec file.
build
Build a rpm. If RPMBUILDOPT is set in the environement, the options in it are passed to rpm on its command line.
An optional parameter, if passed, can be used to specify the program to use to build the rpm. It defaults to rpmbuild.
version
Set/get version.
When retreiving the version, remove any dashes in it.
postinst
postrm
preinst
prerm
Set/get script fields.
When retrieving a value, we have to do some truely sick mangling. Since debian/slackware scripts can be anything -- perl programs or
binary files -- and rpm is limited to only shell scripts, we need to encode the files and add a scrap of shell script to make it
unextract and run on the fly.
When setting a value, we do some mangling too. Rpm maintainer scripts are typically shell scripts, but often lack the leading shebang
line. This can confuse dpkg, so add the shebang if it looks like there is no shebang magic already in place.
Additionally, it's not uncommon for rpm maintainer scripts to contain bashisms, which can be triggered when they are ran on systems
where /bin/sh is not bash. To work around this, the shebang line of the scripts is changed to use bash.
Also, if the rpm is relocatable, the script could refer to RPM_INSTALL_PREFIX, which is set by rpm at run time. Deal with this by
adding code to the script to set RPM_INSTALL_PREFIX.
arch
Set/get arch field. When the arch field is set, some sanitizing is done first to convert it to the debian format used internally. When
it's retreived it's converted back to rpm form from the internal form.
AUTHOR
Joey Hess <joey@kitenet.net>
perl v5.14.2 2011-08-05 Alien::Package::Rpm(3pm)