I have a file that comes in as 20081002_invoices.txt and needs to go out as
invoices(20081002).xls When ran this file should have three seperate fields as follows:
column1 column2 column3
data1 data2 data3
when i run the script it produces the invoices(20081002).xls but moves... (1 Reply)
Hi All,
I am very new in programming. I need some help.
I have one input file like:
Number of disabled taxa: 9
Loading mapping file: ncbi.map
Load mapping:
taxId2TaxLevel: 469951
--- Subsample reads (20%): 66680 of 334386
Processing: tree-from-summary
Running tree-from-summary... (21 Replies)
I`m having output file which contain following no which changes every time i run script.The number given below are there in file and i have to fatch them from file.
12
15
56
158
365
165
598
568
265
256
258
now i want to use above number from output to input as $j
r=`/omp/bin/ICIC... (1 Reply)
I'd like to do an if / else if condition and print to different files.
Something like:
awk '{
if ($1 == "yes") print $2, $4 < infile > outfile1 ;
else if ($1 == "No") print $2, $4 < infile > outfile2
}'
Obviously I don't know the syntax.
Thanks so much. (5 Replies)
Hello,
Compilation of the line "cout = outFile" throws error
"Error: std::ios_base::operator=(const std::ios_base&) is not accessible from std::ios ::operator=(const std::ios &)."
outFile is declared as "static ofstream".
Thanks,
Shafi (3 Replies)
Hi Everyone,
I have two files i.e. one file2 contains today's data and the other file1 contains Yesterday's data.
The data in the files contains 226 columns and the data for the coulums separated by a Pipe "|" delimiter.
Now, I have 4 Primary keys (coulumns) by which I have to compare file2 and... (10 Replies)
Hi
I am writing a perl script which checks for the specific column values from a file and writes to the OUT file.
So the feed file has a header information and footer information.
I header information isaround107 lines i.e.
Starts with
START-OF-FILE
.......
so on ....
... (11 Replies)
Hi,
I'm trying to use pyExcelerator's module "xls2csv" converter in ubuntu.
The following works great, except the standard out is in the terminal.
sudo python xls2csv.py test.xls
I want the csv delimited output to be redirected to a file. When I enter....
sudo python xls2csv.py test.xls... (5 Replies)
Hello,
Each time a user log on to host, they receive below error:
-sh: /tmp/outfile: cannot create
Example:
$ ssh host
user@host's password:
Last login: Fri Dec 4 08:17:28 2015 from client.ref
|-----------------------------------------------------------------|
-sh:... (2 Replies)
Good day, I am trying to run the following command but it does not seem to work.
# mysql -pPassword asteriskcdrdb -s -b -e "select 'Account ID','Destination','Operator','Provider','Date','BillSec','Rate id','Cost' UNION select accountcode,dst,'PBX',route_name,date_format(calldate,'%Y/%c/%e... (8 Replies)
Discussion started by: esgaroth32
8 Replies
LEARN ABOUT DEBIAN
probalign
PROBALIGN(1) User Commands PROBALIGN(1)NAME
probalign - Align sequences in MFAFILE(s) and print result to standard output
DESCRIPTION
PROBALIGN Version 1.4 (Nov 2010) aligns multiple protein sequences and prints to the standard output. Written by Satish Chikkagoudar and
Usman Roshan using code from PROBCONS version 1.1 (written by Chuong Do) and based upon probA (written by Ulrike Muckstein).
PROBALIGN 1.4 comes with ABSOLUTELY NO WARRANTY. This is free software, and you are welcome to redistribute it under certain conditions.
See the README file for details.
Usage:
probalign [OPTION]... [MFAFILE]...
Description:
Align sequences in MFAFILE(s) and print result to standard output
-clustalw
use CLUSTALW output format instead of MFA
-v, --verbose
report progress while aligning (default: off)
-a, --alignment-order
print sequences in alignment order rather than input order (default: off)
-T, -temperature
Sets the thermodynamic temperature parameter
(default: 5 (for protein data mode), 1 ( for nucleotide data mode)).
-score_matrix, --score_matrix
Sets the type of scoring matrix used to calculate the posterior probabilities (default: gonnet_160, representing gonnet 160, refer
README for details)
-go, --gap-open
This option can be used to specify the gap open parameter. The default for Gonnet 160 (protein) is 22 and nucleotide (simple matrix)
is 4.
-ge, --gap-extension
This option can be used to specify the gap extension parameter. The default for Gonnet 160 (protein) is 1 and nucleotide (simple
matrix) is 0.25.
-nuc
Specify this option to indicate that inputted sequences are nucleotide sequences
-prot
Specify this option to indicate that inputted sequences are protein sequences [DEFAULT]
-showPP
Outputs the posterior probabilities of alignment columns as a new sequence named Posterior Probabilities (The probability values are
scaled to be between integers between 0 and 9).
probalign 1.4 May 2011 PROBALIGN(1)