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Top Forums UNIX for Dummies Questions & Answers Filling a tab-separated file with known missing entries in columns Post 302621399 by Scrutinizer on Tuesday 10th of April 2012 10:42:35 AM
Old 04-10-2012
Use three Array elements to hold on to the last A,B or W value. The part after the last _ is the designator. Empty fields get stored in a 4th element array[" "], that never gets printed.. Try something like this..
Code:
awk -F'\t' '{for(i=1;i<=NF;i++){c=$i; sub(/.*_/,x,c); P[c]=$i} print P["A"],P["W"],P["B"]}' OFS='\t' infile

Output:
Code:
PHE_205_A	TIP_127_W	ARG_150_B
MET_1150_A	TIP_12_W	VAL_11_B
GLU_60_A	TIP_130_W	ARG_143_B
LEU_1033_A	TIP_203_W	ARG_14_B
SER_1092_A	TIP_203_W	ARG_14_B
THR_1090_A	TIP_203_W	ARG_14_B
SER_1092_A	TIP_25_W	SER_104_B
SER_1092_A	TIP_25_W	TYR_15_B
ASP_61_A	TIP_34_W	THR_134_B
SER_1204_A	TIP_46_W	ASP_8_B
ASP_61_A	TIP_63_W	ARG_131_B
THR_90_A	TIP_76_W	TYR_49_B
THR_1090_A	TIP_91_W	SER_100_B


Last edited by Scrutinizer; 04-10-2012 at 11:49 AM..
This User Gave Thanks to Scrutinizer For This Post:
 

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UASORT(3)								 1								 UASORT(3)

uasort - Sort an array with a user-defined comparison function and maintain index association

SYNOPSIS
bool uasort (array &$array, callable $value_compare_func) DESCRIPTION
This function sorts an array such that array indices maintain their correlation with the array elements they are associated with, using a user-defined comparison function. This is used mainly when sorting associative arrays where the actual element order is significant. Note If two members compare as equal, their relative order in the sorted array is undefined. PARAMETERS
o $array - The input array. o $value_compare_func - See usort(3) and uksort(3) for examples of user-defined comparison functions. RETURN VALUES
Returns TRUE on success or FALSE on failure. EXAMPLES
Example #1 Basic uasort(3) example <?php // Comparison function function cmp($a, $b) { if ($a == $b) { return 0; } return ($a < $b) ? -1 : 1; } // Array to be sorted $array = array('a' => 4, 'b' => 8, 'c' => -1, 'd' => -9, 'e' => 2, 'f' => 5, 'g' => 3, 'h' => -4); print_r($array); // Sort and print the resulting array uasort($array, 'cmp'); print_r($array); ?> The above example will output: Array ( [a] => 4 [b] => 8 [c] => -1 [d] => -9 [e] => 2 [f] => 5 [g] => 3 [h] => -4 ) Array ( [d] => -9 [h] => -4 [c] => -1 [e] => 2 [g] => 3 [a] => 4 [f] => 5 [b] => 8 ) SEE ALSO
usort(3), The comparison of array sorting functions. PHP Documentation Group UASORT(3)
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