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Top Forums Shell Programming and Scripting finding distance between numbers Post 302607960 by Diya123 on Thursday 15th of March 2012 07:22:18 PM
Old 03-15-2012
finding distance between numbers

Hi,

I have a file as


Code:
ABC 1634230,1634284,1634349,1634468 1634272,1634301,1634356,1634534

What I want is to find distance between the numbers.. column 1 is the gene name and column 2 are starts and column 3 are their respective stops for the starts. So what I want is column 3 which has +1 added to each value in column 2 except for the last value and -1 subtracted to each value except for the 1st value in column 1..

output:

Code:
 ABC 1634230,1634284,1634349,1634468  1634272,1634301,1634356,1634534 1634283,1634348,1634467 1634273,1634302,1634357

I have 40,000 such rows

Thanks,
 

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DB2_FIELD_WIDTH(3)							 1							DB2_FIELD_WIDTH(3)

db2_field_width - Returns the width of the current value of the indicated column in a result set

SYNOPSIS
int db2_field_width (resource $stmt, mixed $column) DESCRIPTION
Returns the width of the current value of the indicated column in a result set. This is the maximum width of the column for a fixed-length data type, or the actual width of the column for a variable-length data type. PARAMETERS
o $stmt - Specifies a statement resource containing a result set. o $column - Specifies the column in the result set. This can either be an integer representing the 0-indexed position of the column, or a string containing the name of the column. RETURN VALUES
Returns an integer containing the width of the specified character or binary data type column in a result set. If the specified column does not exist in the result set, db2_field_width(3) returns FALSE. SEE ALSO
db2_field_display_size(3), db2_field_name(3), db2_field_num(3), db2_field_precision(3), db2_field_scale(3), db2_field_type(3). PHP Documentation Group DB2_FIELD_WIDTH(3)
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