Sponsored Content
Top Forums UNIX for Dummies Questions & Answers Search and extract matching patterns Post 302602379 by Peasant on Monday 27th of February 2012 07:12:02 AM
Old 02-27-2012
See if this awk fills your requirment :
Code:
NR==FNR {
split($3,a,","); for (i in a) vl[a[i]] = $1 FS $2 FS vl[a[i]]
}
NR!=FNR {
idx=$1
OFS="\t"
if ( idx in vl ) {
	final[vl[idx]] = final[vl[idx]] OFS idx
	}
}
END {
	for ( z in final )
	print z FS final[z]
}

Save it as program.awk and run :
Code:
awk -f program.awk bigdb.tab file1.tab file2.tab

Also, you have a typo in bigdb.tab, i belive K-ent shoud be K_ent

Hope it works for you
Regards
Peasant.
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

removing certain paragraphs for matching patterns

Hi, I have a log file which might have certain paragraphs. Switch not possible Error code 1234 Process number 678 Log not available Error code 567 Process number 874 ..... ...... ...... Now I create an exception file like this. cat text.exp Error code 1234 Process number 874 (7 Replies)
Discussion started by: kaushys
7 Replies

2. Shell Programming and Scripting

AWK: matching patterns in 2 different files

In a directory, there are two different file extensions (*.txt and *.xyz) having similar names of numerical strings (*). The (*.txt) contains 5000 multiple files and the (*.xyz) also contains 5000 multiple files. Each of the files has around 4000 rows and 8 columns, with several unique string... (5 Replies)
Discussion started by: asanjuan
5 Replies

3. Shell Programming and Scripting

Matching patterns

I have a file name in $f. If $f has "-" at the beginning, or "=", or does not have extension ".ry" or ".xt" or ".dat" then cerr would not be empty. Tried the following but having some problems. set cerr = `echo $f | awk '/^-|=|!.ry|!.xt|!.dat/'` (4 Replies)
Discussion started by: kristinu
4 Replies

4. Shell Programming and Scripting

print lines between 2 matching patterns

Hi Guys, I have file like below, I want to print all lines between test1231233 to its 10 occurrence(till line 41) test1231233 qwe qwe qweq123 test1231233 qwe qwe qweq23 test1231233 qwe qwe qweq123 test1231233 qwe qwe qweq123131 (3 Replies)
Discussion started by: jagnikam
3 Replies

5. UNIX for Dummies Questions & Answers

Find records with matching patterns

Hi, I need to find records with a search string from a file. Search strings are provided in a file. For eg. search_String.txt file is like below chicago mexico newark sanhose and the file from where the records need to be fetched is given below src_file:... (1 Reply)
Discussion started by: sbhuvana20
1 Replies

6. Shell Programming and Scripting

awk extract strings matching multiple patterns

Hi, I wasn't quite sure how to title this one! Here goes: I have some already partially parsed log files, which I now need to extract info from. Because of the way they are originally and the fact they have been partially processed already, I can't make any assumptions on the number of... (8 Replies)
Discussion started by: chrissycc
8 Replies

7. Shell Programming and Scripting

Finding matching patterns in two files

Hi, I have requirement to find the matching patterns of two files in Unix. One file is the log file and the other is the error list file. If any pattern in the log file matches the list of errors in the error list file, then I would need to find the counts of the match. For example, ... (5 Replies)
Discussion started by: Bobby_2000
5 Replies

8. Shell Programming and Scripting

How can I extract XML block around matching search string?

I want to extract XML block surrounding search string Ex: print XML block for string "myapp1-ear" surrounded by "<application> .. </application>" Input XML: <?xml version="1.0" encoding="UTF-8"?> <deployment-request> <requestor> <first-name>kchinnam</first-name> ... (16 Replies)
Discussion started by: kchinnam
16 Replies

9. Shell Programming and Scripting

Delete patterns matching

Delete patterns matching OS version: RHEL 7.3 Shell : Bash I have a file like below (pattern.txt). I need to delete all lines starting with the following words (words separated by comma below) and ) character. LOGGING, NOCOMPRESS, TABLESPACE , PCTFREE, INITRANS, MAXTRANS, STORAGE,... (3 Replies)
Discussion started by: John K
3 Replies

10. Shell Programming and Scripting

Extended grep not matching some patterns

i have a file where the hostnames and variables are in same line in below format, am able extract some part variables while otherlike subscriptions and handler is missing. can you please correct me if grep is able to perform this ? cat /tmp/test localhost subscriptions='' handler="genie"... (14 Replies)
Discussion started by: rakeshkumar
14 Replies
List(3pm)						  LogReport's Lire Documentation						 List(3pm)

NAME
Lire::Config::List - List Value Object. DESCRIPTION
Used for configuration parameters which contains a list of values. elements() Returns this list's values as an array of Lire::Config::Value object. get( $idx ) Returns the value stored at index $idx of this list. An exception is thrown if the index is out-of-bounds. remove( $idx ) Removes the value stored at index $idx of this list. An exception is thrown if the index is out-of-bounds. It returns the deleted element. clear() Removes all elements from this list append( $val, [ $idx ] ) Adds $val to after element $idx. If $idx is omitted, the element will be added at the end of the array. A negative index is interpreted relative to the end of the array. move( $idx, $new_idx ) Moves element $idx at position $new_idx. Indices can be negative and are interpreted as position relative to the end of the array. set( $idx, $value ) Replaces value at index $idx with $value. AUTHOR
Wessel Dankers <wsl@logreport.org> VERSION
$Id: List.pm,v 1.16 2006/07/23 13:16:30 vanbaal Exp $ COPYRIGHT
Copyright (C) 2002-2004 Stichting LogReport Foundation LogReport@LogReport.org This file is part of Lire. Lire is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program (see COPYING); if not, check with http://www.gnu.org/copyleft/gpl.html. Lire 2.1.1 2006-07-23 List(3pm)
All times are GMT -4. The time now is 07:28 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy