02-22-2012
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi all,
I have a huge csv file with the following format of data,
Num SNPs, 549997
Total SNPs,555352
Num Samples, 157
SNP, SampleID, Allele1, Allele2
A001,AB1,A,A
A002,AB1,A,A
A003,AB1,A,A
...
...
...
I would like to write out a list of unique SNP (column 1). Could you... (3 Replies)
Discussion started by: phoeberunner
3 Replies
2. Shell Programming and Scripting
Hi All,
I have a file which is having 3 columns as (string string integer)
a b 1
x y 2
p k 5
y y 4
.....
.....
Question:
I want get the unique value of column 2 in a sorted way(on column 2) and the sum of the 3rd column of the corresponding rows. e.g the above file should return the... (6 Replies)
Discussion started by: amigarus
6 Replies
3. Shell Programming and Scripting
I have the perl data structure and what i need to do is find all values in
@{$extractColumns{'2'}{'D'}} which are not there in @{$extractColumns{'2'}{'M'}} but seems like i need to put a flag somewhere and i messed up
foreach my $order (keys %extractColumns)
{
foreach my $value... (2 Replies)
Discussion started by: dinjo_jo
2 Replies
4. Shell Programming and Scripting
Hello,
I have 2 columns (1st column has multiple entries but the corresponding values in the column 2 may be the same or different.) however I want to extract unique values for each entry in column 1 by assigning the max value from column 2
SDF4 -0.211654
SDF4 0.978068
... (1 Reply)
Discussion started by: Diya123
1 Replies
5. Shell Programming and Scripting
Hi,
Im looking for a script which will calculate the unique strings column 2 & 3 values in a log as mentioned in example
eg:-
bag 12 12
bag 18 15
bags 15 13
bags 15 14
blazer 24 24
blazer 33 32
boots 19 15
Result should be:-
bag 30 27
bags 30 27... (9 Replies)
Discussion started by: Paulwintech
9 Replies
6. Linux
cat sample.csv
ID,Name,no
1,AAA,1
2,BBB,1
3,AAA,1
4,BBB,1
cut -d',' -f2 sample.csv | sort | uniq
this gives only the 2nd column values
Name
AAA
BBB
How to I get all the columns of CSV along with this? (1 Reply)
Discussion started by: sanvel
1 Replies
7. Shell Programming and Scripting
Hi Folks,
I have the below feed file named abc1.txt in which you can see there is a title and below is the respective values in the rows and it is completely pipe delimited file ,.
... (4 Replies)
Discussion started by: punpun66
4 Replies
8. UNIX for Dummies Questions & Answers
Dear Unix Gurus,
I have a text file with multiple columns, for example, see sample.txt below
0 1 301
1 4 250
2 6 140
3 2 610
7 1 180I want to find the maximum in, say, column 3, normalise all the values to this maximum value (to 4 decimal places) and spit everything into a new... (2 Replies)
Discussion started by: tintin72
2 Replies
9. Shell Programming and Scripting
Hi,
I have multiple files that each contain four columns of strings:
File1:
Code:
123 abc gfh 273
456 ddff jfh 837
789 ghi u4u 395
File2:
Code:
123 abc dd fu
456 def 457 nd
891 384 djh 783
I want to compare the strings in Column 1 of File 1 with each other file and Print in... (3 Replies)
Discussion started by: owwow14
3 Replies
10. Shell Programming and Scripting
Hello,
I need to find out the minimum and maximum values based on specific column, and then print out the entire row with the max value.
Infile.txt:
scf6 290173 290416 . + X_047241 T_00113118-1
scf6 290491 290957 . + X_047241 T_00113118-2
scf6 290898 290957 . + X_047241 T_00113119-3
scf6... (2 Replies)
Discussion started by: yifangt
2 Replies
LEARN ABOUT CENTOS
reporter-upload
REPORTER-UPLOAD(1) LIBREPORT MANUAL REPORTER-UPLOAD(1)
NAME
reporter-upload - Uploads compressed tarball of problem directory.
SYNOPSIS
reporter-upload [-c CONFFILE]... [-d DIR] [-u URL]
DESCRIPTION
The tool is used to create a compressed tarball of the problem directory and upload it to a URL. Supported protocols include FTP, FTPS,
HTTP, HTTPS, SCP, SFTP, TFTP and FILE.
Configuration file
Configuration file contains entries in a format "Option = Value".
The options are:
URL
The URL where tarball should be uploaded.
Integration with ABRT events
reporter-upload can be used as a reporter, to allow users to upload compressed tarballs of problem directories to a configured URL. This
usage can be configured in /etc/libreport/report_event.conf:
EVENT=report_Upload reporter-upload
It can be also used on the post-create event to upload it automatically.
EVENT=post-create reporter-upload
OPTIONS
-d DIR
Path to problem directory.
-c CONFFILE
Path to configuration file. When used in ABRT event system, the file contains site-wide configuration. Users can change the values via
environment variables.
-u URL
The URL where tarball should be uploaded. URL should have form protocol://[user[:pass]@]host/dir/[file.tar.gz] where protocol can be
http(s), ftp, scp, or file. File protocol can't have user and host parts: file.tar.gz[1]. If URL ends with a slash, the archive name
will be generated and appended to URL; otherwise, URL will be used as full file name.
ENVIRONMENT VARIABLES
Environment variables take precedence over values provided in the configuration file.
Upload_URL
The URL where should be the tarball uploaded.
AUTHORS
o ABRT team
NOTES
1. file.tar.gz
file:///dir/
LIBREPORT 2.1.11 06/18/2014 REPORTER-UPLOAD(1)