02-20-2012
script to match name with code?
I need a script that could take in a line from one file and match the line up with codes in the order file.
My first file, called
names.txt ,contains:
>123456789
>987654321
>15946873
>157987513
The other file, called
data,contains:
GB_00012.faa
GB_6789333.faa
GB_100098.faa
GB_1237700.faa
All the data files contain a line startin with ">" symbol, and contain after that point somwhere the names.txt identifier. Ideally I would love the output to be:
>123456789 GB_1237700.faa >line from GB file.
I know how to do it manually using grep, but having around 10000 different identifiers and three coupled files together, would take me ages to go through one by one. If this is possible to make in a script, I'd be really thankful for the help!
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LEARN ABOUT MOJAVE
set_color
set_color(1) fish set_color(1)
NAME
set_color - set_color - set the terminal color
set_color - set the terminal color
Synopsis
set_color [-v --version] [-h --help] [-b --background COLOR] [COLOR]
Description
Change the foreground and/or background color of the terminal. COLOR is one of black, red, green, brown, yellow, blue, magenta, purple,
cyan, white and normal.
o -b, --background Set the background color
o -c, --print-colors Prints a list of all valid color names
o -h, --help Display help message and exit
o -o, --bold Set bold or extra bright mode
o -u, --underline Set underlined mode
o -v, --version Display version and exit
Calling set_color normal will set the terminal color to whatever is the default color of the terminal.
Some terminals use the --bold escape sequence to switch to a brighter color set. On such terminals, set_color white will result in a grey
font color, while set_color --bold white will result in a white font color.
Not all terminal emulators support all these features. This is not a bug in set_color but a missing feature in the terminal emulator.
set_color uses the terminfo database to look up how to change terminal colors on whatever terminal is in use. Some systems have old and
incomplete terminfo databases, and may lack color information for terminals that support it. Download and install the latest version of
ncurses and recompile fish against it in order to fix this issue.
Version 1.23.1 Sun Jan 8 2012 set_color(1)