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Full Discussion: Common records after matching on different columns
Top Forums Shell Programming and Scripting Common records after matching on different columns Post 302597444 by Shell_Life on Friday 10th of February 2012 10:28:02 AM
Old 02-10-2012
Quote:
Originally Posted by jacobs.smith
The shell script produces the following output.

opfromshell.txt
Code:
chr1 300 400 1.txt
chr1 350 467 1.txt

But, I was looking for

Originaloutput.txt
Code:
chr1 300 400 1.txt
chr1 350 467 1.txt
chr1 201 299 2.txt
chr2 800 1000 2.txt
chr2 100 200 2.txt
chr3 500 600 2.txt

Please, no offense. Since the earlier replies in that post worked, I didn't want to bother Shell_life.
If you had noticed, I made the two file names as variables for the shell.

This way, to have your desired output, you just run it twice:
1)
Code:
mF1='1.txt'
mF2='2.txt'

2)
Code:
mF1='2.txt'
mF2='1.txt'

Here is the same solution again:

Code:
#!/bin/ksh
typeset -i mFromA mToA mFromB mToB
mF1='1.txt'      ### <======= Change file name here (I)
mF2='2.txt'      ### <======= Change file name here (II)
mPrevTag=''
#### sort is used to reduce the number of "grep"
sort ${mF1} | while read mTagA mFromA mToA; do
  if [[ "${mTagA}" != "${mPrevTag}" ]]; then
    grep "${mTagA}" ${mF2} > ${mF2}.tmp
  fi
  mFound="N"
  while read mTagB mFromB mToB; do
    if [[ ${mToA} -ge ${mFromB} && ${mFromA} -le ${mToB} ]]; then
      mFound="Y"
      break
    fi
  done < ${mF2}.tmp
  if [[ "${mFound}" = "N" ]]; then
    echo ${mTagA} ${mFromA} ${mToA} ${mF1}
  fi
  mPrevTag=${mTagA}
done

 

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LEARN ABOUT DEBIAN

grcompiler

grcompiler(1)															     grcompiler(1)

NAME

       grcompiler - Compile GDL into a TrueType Font

SYNOPSIS

       grcompiler [-d] [-D] [-g] [-n number] [-v number] [-w number] [-wall] [-q] gdl-file font-file [output-file] [output-fontname]

Description
       Grcompiler  compiles  a	Graphite Description Language description of the smarts for a font along with a TrueType Font to create a graphite
       font with graphite tables in it.

       -d     Generate XML debugger file.

       -D     Generate all debugger files.

       -g     Permit and ignore invalid glyph definitions.

       -nnumber
	      Set name table start location.

       -q     Quiet mode (no messages except on error).

       -vnumber
	      Set Silf table version number.

       -wnnnn Ignore warning with the given number. This option may be repeated.

       -wall  Display all warnings.

Environment
       grcompiler makes use of the following environment variables

       GDLPP  Specifies the command to execute to run the GDL preprocessor

Files
       gdlerr.txt
	      Warnings and errors are output to this file.

       dbg_classes.txt
	      Debug file that specifies the classes stored in the font in terms of their GDL source and containing glyph ids in hex.

       dbg_cmap.txt
	      Debug file giving Unicode to glyph mapping of all the glyphs in the font and vice versa.

       dbg_enginecode.txt
	      Debug file containing the action code and constraint code associated with each pass and rule in a pass.

       dbg_fsm.txt
	      Debug file that gives the finite state machines of each pass and the rules referenced. For each pass, a  mapping	is  given  between
	      glyph and column number.

       dbg_glyphattrs.txt
	      Debug file containing all the glyph attributes and their names, along with values specified for each glyph.

       dbg_parsetree.txt
	      Debug file giving the complete parse tree of the GDL source file.

       dbg_ruleprec.txt
	      Debug file that lists the rules in precedence order (order in which they will be tested) for each pass.

       $_temp.gdl
	      Debug file containing the output of gdlpp

Author
       Martin Hosken <mhosken@users.sourceforge.net>

							   $Date: 2012-05-29 11:36:50 $ 					     grcompiler(1)
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