I have a .vcf file which contains 8 coulmns and the data under each column as shown below,
Under the 8th cloumn i.e INFO, we had DP=51;VDB=0.000;........PV4-1,1,0.31,1
I want to split the data separated by ";" in the 8th column into separate columns using awk which should look like,
Any help would be highly appreciated using awk
Last edited by Franklin52; 02-08-2012 at 06:02 AM..
Reason: Please use code tags for code and data samples, thank you
The log reads as follows.
fname1;lname1;eid1;addr;pincode1;
fname2;lname2;eid2;addr2;pincode2;
fname3;lname3;eid3;addr3;pincode3;
fname4;lname4;eid;addr4;pincode4;
how do i extract only fname and save it in an array
similarly for lname and so on
i tried reading a file and cutting each... (5 Replies)
Hi.
I have a tab separated file that has a couple nearly identical lines. When doing:
sort file | uniq > file.new
It passes through the nearly identical lines because, well, they still are unique.
a)
I want to look only at field x for uniqueness and if the content in field x is the... (1 Reply)
Dear experts
I have files like
ABD : 5869 events, relative ratio : 1.173800E-01 , sum of ratios : 1.173800E-01
VBD : 12147 events, relative ratio : 2.429400E-01 , sum of ratios : 3.603200E-01
SDF : 17000 events, relative ratio : 3.400000E-01 , sum of ratios : 7.003200E-01
OIP: 14984... (9 Replies)
Hello;
I have a file consists of 4 columns separated by tab. The problem is the third fields. Some of the them are very long but can be split by the vertical bar "|". Also some of them do not contain the string "UniProt", but I could ignore it at this moment, and sort the file afterwards. Here is... (5 Replies)
Hello,
I would like to kindly ask you for help. I have a file with some lines in one row separated by semicolon. I need to find out, if the line I have in different variable is included in this file. e.g
I have a file foo.txt with lines
A=hello there;hello world;hello there world
In... (6 Replies)
I want to use awk to split fields and put them into a file
but I don't know the number of fields
for example, in the following line
Ports: 22/filtered/tcp//ssh///, 53/open/tcp//tcpwrapped///, 111/filtered/tcp//rpcbind///, 543/filtered/tcp//klogin///, 544/filtered/tcp//kshell///,... (3 Replies)
I am trying to re-format a .csv file using awk. I have 6 fields in the .csv file. Some of the fields are enclosed in double quotes and contain comma's inside the quotes. awk is breaking this into multiple fields.
Sample lines from the .csv file:
Device Name,Personnel,Date,Solution... (1 Reply)
Hello Team,
Could you please help me with the below question?
I have a file with the following properties
1) File Delimiter is ;
2) Text columns are within double quotes
3) Numeric columns will not have double quotes
4) File has total 6 columns
Please see a sample record from file
... (3 Replies)
In the tab-delimited input below I am trying to use awk to -10 from $2 and +10 to $3. Something like
awk -F'\t' -v OFS='\t' -v s=10 '{split($4,a,":"); print $1,$2-s,$3+s,a,$5,$6} | awk {split(a,b,"-"); print $1,$2-s,$3+s,b-s,b+s,$5,$6}' input
should do that. I also need to -10 from $4... (2 Replies)
can anyone help me!!!! How to I parse the CSV file
file name : abc.csv (csv file) The above file containing data like
abv,sfs,,hju,',',jkk wff,fst,,rgr,',',rgr ere,edf,erg,',',rgr,rgr I have a requirement like i have to extract different field and assign them into different... (4 Replies)
Discussion started by: J.Jena
4 Replies
LEARN ABOUT MOJAVE
pagesizes
PAGESIZES(5) File Formats Manual PAGESIZES(5)NAME
pagesizes - HylaFAX page size definitions
DESCRIPTION
The pagesizes database defines the page dimensions and guaranteed reproducible areas (GRA) for well-known page sizes. The GRA is the por-
tion of the page that is guaranteed to be imaged during facsimile transmission. This region is typically less than the full page dimen-
sions because of paper roller contacts and other mechanical aspects of the printing process in a facsimile machine.
All HylaFAX programs that require page size information read the information from this database using a page size name. Documents should
be prepared such that the full page dimensions are employed with the imaged area contained within the GRA.
The system-wide default page size to use in preparing documents for transmission is given by the ``default'' entry in the database. (NB:
the default entry should be placed last so that inverse matches find the real page size name and not the default entry.)
The page size database is an ASCII file with the following format. Each entry consists of whitespace-separated fields:
name abbrev width height gra-width gra-height top-margin left-margin
Fields have the following interpretation:
name the full name for the page size; e.g. ISO A4;
abbrev an abbreviated version of the full name for use in compact listings such as the receive queue listing printed by faxstat(1);
width the full width of the page;
height the full height of the page;
gra-width the width of the GRA;
gra-height the height of the GRA;
top-margin the margin between the top of the full page and the top of the GRA;
left-margin the margin between the left side of the full page the left side of the GRA.
The first two fields must be separated from the subsequent fields by a tab character (possibly followed by more whitespace); this is done
to easily permit blank characters to be included in names. Otherwise fields can be separated by any amount of any kind of whitespace.
Numbers are all base 10 and in basic measurement units (BMU); defined as 1/1200 x 25.4 millimeters for paper output with a scale factor of
one. All fields must be present on a single line; otherwise the entry is ignored. Comments are introduced by the ``#'' character and con-
tinue to the end the line.
Page size database lookups are either by name or by page dimensions. Lookups by name are done by sequentially scanning the entries in the
database for the first entry that has a matching abbreviation or substring of the page size name field. The string comparisons ignore case
so, for example, ``a4'' would match a full name of ``ISO A4''. Lookups by dimension scan the entire database and return the page with the
closest dimensions using a straightforward distance metric. If the difference in dimensions of the closest match is greater than 1/2 inch
on each side, then no page entry is returned for a lookup by dimension.
SEE ALSO hylafax-client(1), faxmail(1), faxstat(1), sendfax(1), sgi2fax(1), textfmt(1).
December 5, 1994 PAGESIZES(5)