I have a .vcf file which contains 8 coulmns and the data under each column as shown below,
Under the 8th cloumn i.e INFO, we had DP=51;VDB=0.000;........PV4-1,1,0.31,1
I want to split the data separated by ";" in the 8th column into separate columns using awk which should look like,
Any help would be highly appreciated using awk
Last edited by Franklin52; 02-08-2012 at 06:02 AM..
Reason: Please use code tags for code and data samples, thank you
The log reads as follows.
fname1;lname1;eid1;addr;pincode1;
fname2;lname2;eid2;addr2;pincode2;
fname3;lname3;eid3;addr3;pincode3;
fname4;lname4;eid;addr4;pincode4;
how do i extract only fname and save it in an array
similarly for lname and so on
i tried reading a file and cutting each... (5 Replies)
Hi.
I have a tab separated file that has a couple nearly identical lines. When doing:
sort file | uniq > file.new
It passes through the nearly identical lines because, well, they still are unique.
a)
I want to look only at field x for uniqueness and if the content in field x is the... (1 Reply)
Dear experts
I have files like
ABD : 5869 events, relative ratio : 1.173800E-01 , sum of ratios : 1.173800E-01
VBD : 12147 events, relative ratio : 2.429400E-01 , sum of ratios : 3.603200E-01
SDF : 17000 events, relative ratio : 3.400000E-01 , sum of ratios : 7.003200E-01
OIP: 14984... (9 Replies)
Hello;
I have a file consists of 4 columns separated by tab. The problem is the third fields. Some of the them are very long but can be split by the vertical bar "|". Also some of them do not contain the string "UniProt", but I could ignore it at this moment, and sort the file afterwards. Here is... (5 Replies)
Hello,
I would like to kindly ask you for help. I have a file with some lines in one row separated by semicolon. I need to find out, if the line I have in different variable is included in this file. e.g
I have a file foo.txt with lines
A=hello there;hello world;hello there world
In... (6 Replies)
I want to use awk to split fields and put them into a file
but I don't know the number of fields
for example, in the following line
Ports: 22/filtered/tcp//ssh///, 53/open/tcp//tcpwrapped///, 111/filtered/tcp//rpcbind///, 543/filtered/tcp//klogin///, 544/filtered/tcp//kshell///,... (3 Replies)
I am trying to re-format a .csv file using awk. I have 6 fields in the .csv file. Some of the fields are enclosed in double quotes and contain comma's inside the quotes. awk is breaking this into multiple fields.
Sample lines from the .csv file:
Device Name,Personnel,Date,Solution... (1 Reply)
Hello Team,
Could you please help me with the below question?
I have a file with the following properties
1) File Delimiter is ;
2) Text columns are within double quotes
3) Numeric columns will not have double quotes
4) File has total 6 columns
Please see a sample record from file
... (3 Replies)
In the tab-delimited input below I am trying to use awk to -10 from $2 and +10 to $3. Something like
awk -F'\t' -v OFS='\t' -v s=10 '{split($4,a,":"); print $1,$2-s,$3+s,a,$5,$6} | awk {split(a,b,"-"); print $1,$2-s,$3+s,b-s,b+s,$5,$6}' input
should do that. I also need to -10 from $4... (2 Replies)
can anyone help me!!!! How to I parse the CSV file
file name : abc.csv (csv file) The above file containing data like
abv,sfs,,hju,',',jkk wff,fst,,rgr,',',rgr ere,edf,erg,',',rgr,rgr I have a requirement like i have to extract different field and assign them into different... (4 Replies)
Discussion started by: J.Jena
4 Replies
LEARN ABOUT MOJAVE
locale::codes::langext5.18
Locale::Codes::LangExt(3pm) Perl Programmers Reference Guide Locale::Codes::LangExt(3pm)NAME
Locale::Codes::LangExt - standard codes for language extension identification
SYNOPSIS
use Locale::Codes::LangExt;
$lext = code2langext('acm'); # $lext gets 'Mesopotamian Arabic'
$code = langext2code('Mesopotamian Arabic'); # $code gets 'acm'
@codes = all_langext_codes();
@names = all_langext_names();
DESCRIPTION
The "Locale::Codes::LangExt" module provides access to standard codes used for identifying language extensions, such as those as defined in
the IANA language registry.
Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default IANA language
registry codes will be used.
SUPPORTED CODE SETS
There are several different code sets you can use for identifying language extensions. A code set may be specified using either a name, or
a constant that is automatically exported by this module.
For example, the two are equivalent:
$lext = code2langext('acm','alpha');
$lext = code2langext('acm',LOCALE_LANGEXT_ALPHA);
The codesets currently supported are:
alpha
This is the set of three-letter (lowercase) codes from the IANA language registry, such as 'acm' for Mesopotamian Arabic.
This is the default code set.
ROUTINES
code2langext ( CODE [,CODESET] )
langext2code ( NAME [,CODESET] )
langext_code2code ( CODE ,CODESET ,CODESET2 )
all_langext_codes ( [CODESET] )
all_langext_names ( [CODESET] )
Locale::Codes::LangExt::rename_langext ( CODE ,NEW_NAME [,CODESET] )
Locale::Codes::LangExt::add_langext ( CODE ,NAME [,CODESET] )
Locale::Codes::LangExt::delete_langext ( CODE [,CODESET] )
Locale::Codes::LangExt::add_langext_alias ( NAME ,NEW_NAME )
Locale::Codes::LangExt::delete_langext_alias ( NAME )
Locale::Codes::LangExt::rename_langext_code ( CODE ,NEW_CODE [,CODESET] )
Locale::Codes::LangExt::add_langext_code_alias ( CODE ,NEW_CODE [,CODESET] )
Locale::Codes::LangExt::delete_langext_code_alias ( CODE [,CODESET] )
These routines are all documented in the Locale::Codes::API man page.
SEE ALSO
Locale::Codes
The Locale-Codes distribution.
Locale::Codes::API
The list of functions supported by this module.
http://www.iana.org/assignments/language-subtag-registry
The IANA language subtag registry.
AUTHOR
See Locale::Codes for full author history.
Currently maintained by Sullivan Beck (sbeck@cpan.org).
COPYRIGHT
Copyright (c) 2011-2013 Sullivan Beck
This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
perl v5.18.2 2013-11-04 Locale::Codes::LangExt(3pm)