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Homework and Emergencies Emergency UNIX and Linux Support Ubuntu filesystem error corrupt GPT label Post 302595893 by ccj4467 on Sunday 5th of February 2012 08:49:57 PM
Old 02-05-2012
Ubuntu filesystem error corrupt GPT label

Need help/advice urgently.Smilie

I really shot myself in the foot this time. Here is the scenario
Have a Solaris server Solaris 10 x86 Update 8.
Installed an LSI MegaRaid 9280 raid controller and attached a 16 bay JBOD box to it, created a RAID6 virtual drive with 1 hot spare.

Created a ZFS filesystem on it and loaded it up with users data about 7.6TB.
Created another identical system and rsynced the data from the first to the second.
Both of the servers are to act as fileservers exporting the directoies via NFS

Then I discovered the disk performance was horrible, did some research and discover my configuration was less the ideal. I decide to install Ubuntu 10.04LTS server on one of the machines and rebuild the RAID filesystem. This is where I shot myself in the foot.

I did zpool destroy on the ZFS system
Then installed Ubuntu
Ubuntu recognized the disk and an fdisk -l displayed the correct partitioning.

Code:
Disk /dev/sdb: 12995.5 GB, 12995497295872 bytes
255 heads, 63 sectors/track, 1579945 cylinders
Units = cylinders of 16065 * 512 = 8225280 bytes
Sector size (logical/physical): 512 bytes / 512 bytes
I/O size (minimum/optimal): 512 bytes / 512 bytes
Disk identifier: 0x08046e04

   Device Boot      Start         End      Blocks   Id  System
/dev/sdb1               1      267350  2147483647+  ee  GPT

I then created an ext3 filesystem on it, loaded all of the data on it and things were fine for about a week.

I started get I/O errors any time I accessed the filesystem. I tried unmounting the file system and remounting but it would not remount

Code:
root@fileserver2:~/testdisk-6.13# mount /dev/sdb1 /raid2
mount: special device /dev/sdb1 does not exist

Tried rebooting still no luck

I ran parted then and it gives this error:

Code:
root@fileserver2:~/testdisk-6.13# parted /dev/sdb
GNU Parted 2.2
Using /dev/sdb
Welcome to GNU Parted! Type 'help' to view a list of commands.
(parted) print
Error: /dev/sdb: unrecognised disk label
(parted) quit

I then realized that when I created the filesystem I had not run parted to create a proper partition table. Big oops.

A few questions questions

1 Why would mkfs allow me to create a filesystem on disk that was not partitioned correctly?

Why did it take a week for things to go south?

and finally is this a reasoble way to recover from my screwup:

Run parted:

Code:
mklabel gpt
rescue 0 267350

Any hints, advice or other solutions would be greatly appreciated.
 

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PARTX(8)						      System Manager's Manual							  PARTX(8)

NAME
partx - tell the Linux kernel about the presence and numbering of on-disk partitions SYNOPSIS
partx [-a|-d|-s] [-t TYPE] [-n M:N] [-] disk partx [-a|-d|-s] [-t TYPE] partition [disk] DESCRIPTION
Given a device or disk-image, partx tries to parse the partition table and list its contents. It optionally adds or removes partitions. The disk argument is optional when a partition argument is provided. To force scanning a partition as if it were a whole disk (for example to list nested subpartitions), use the argument "-". For example: partx --show - /dev/sda3 This will see sda3 as a whole-disk rather than a partition. This is not an fdisk program -- adding and removing partitions does not change the disk, it just tells the kernel about the presence and numbering of on-disk partitions. OPTIONS
-a, --add Add the specified partitions, or read the disk and add all partitions. -b, --bytes Print the SIZE column in bytes rather than in human-readable format. -d, --delete Delete the specified partitions or all partitions. -g, --noheadings Do not print a header line. -l, --list List the partitions. Note that all numbers are in 512-byte sectors. This output format is DEPRECATED in favour of --show. Don't use it in newly written scripts. -o, --output list Define the output columns to use for --show and --raw output. If no output arrangement is specified, then a default set is used. Use --help to get list of all supported columns. -r, --raw Use the raw output format. -s, --show List the partitions. All numbers (except SIZE) are in 512-byte sectors. The output columns can be rearranged with the --output option. -t, --type type Specify the partition table type -- aix, bsd, dos, gpt, mac, minix, sgi, solaris_x86, sun, ultrix or unixware. -n, --nr M:N Specify the range of partitions. For backward compatibility also the format <M-N> is supported. The range may contain negative numbers, for example "--nr :-1" means the last partition, and "--nr -2:-1" means the last two partitions. Supported range specifi- cations are: <M> Specifies just one partition (e.g. --nr 3). <M:> Specifies lower limit only (e.g. --nr 2:). <:N> Specifies upper limit only (e.g. --nr :4). <M:N> or <M-N> Specifies lower and upper limits (e.g. --nr 2:4). EXAMPLES
partx --show /dev/sdb3 partx --show --nr 3 /dev/sdb partx --show /dev/sdb3 /dev/sdb All three commands list partition 3 of /dev/sdb. partx --show - /dev/sdb3 Lists all subpartitions on /dev/sdb3 (the device is used as whole-disk). partx -o START -g --nr 3 /dev/sdb Prints the start sector of partition 5 on /dev/sda without header. partx -o SECTORS,SIZE /dev/sda5 /dev/sda Lists the length in sectors and human-readable size of partition 5 on /dev/sda. partx --add --nr 3:5 /dev/sdd Adds all available partitions from 3 to 5 (inclusive) on /dev/sdd. partx -d --nr :-1 /dev/sdd Removes the last partition on /dev/sdd. SEE ALSO
addpart(8), delpart(8), fdisk(8), parted(8), partprobe(8) AUTHORS
Davidlohr Bueso <dave@gnu.org> Karel Zak <kzak@redhat.com> The original version was written by Andries E. Brouwer <aeb@cwi.nl>. AVAILABILITY
The partx command is part of the util-linux package and is available from ftp://ftp.kernel.org/pub/linux/utils/util-linux/. 1 Feb 2011 PARTX(8)
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