02-03-2012
I think chr1 1500 2500 positive ABC shouldn't be in your output (1234 is not between 1500 and 2500). The same goes for chr2 5800 6500 asterick XYZ(5643 is not between 5800 and 6500)...
Last edited by bartus11; 02-03-2012 at 02:45 PM..
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi there,
I have a couple of files I need to merge. I can do a simple merge by concatenating them into one larger file.
But then I need to filter the file to get a desired result.
The output looks like this:
TRNH 0000000010941
ORDH
OADR
OADR
ORDL
ENDT 1116399 000000003... (2 Replies)
Discussion started by: Meert
2 Replies
2. Shell Programming and Scripting
i have try , but i think i will never learn awk :(
now i have 2 files :
a
1:aaa:2:aaa1
2:bbb:2:bbb1
3:ccc:3:ccc1
b
aaa:2
bbb:0
ccc:3
output:
for all lines where a.$2 == b.$1
i want to compare a.$3 != b.$2 if true then set err=1 if false set err=0
and print all lines from file a +... (2 Replies)
Discussion started by: pp56825
2 Replies
3. Shell Programming and Scripting
I have 2 files pipe delimted and want to merge them based on a key
e.g file 1
123|xxx|yyy|zzz
345|xab|yzy|zyz
456|sss|ttt|foo
file 2
123|hhh|ggg|xxx
345|ddd|www|ddd|fff
456|ddd|sss|sss|eee
so if the key is the first field, and the result should be file 1 with field 2 from file 2... (24 Replies)
Discussion started by: klut
24 Replies
4. Shell Programming and Scripting
1. if the 1st row IDs of input1 (ID1/ID2.....) is equal to any IDNames of input2
print all relevant values together as defined in the output.
2. A bit tricky part is IDno in the output. All we need to do is numbering same kind of
letters as 1 (aa of ID1) and different letters as 2 (ab... (4 Replies)
Discussion started by: ruby_sgp
4 Replies
5. Shell Programming and Scripting
I want to write a scrpit to merge files row wise (actually concatinating)
main.txt
X Y Z
file 1
A B C
file 2
1 2 3
now i want the script to check if the file1 is empty or not, if empty then make it like
A B C
1 2 3
again to check if second file is empty if not do as done... (0 Replies)
Discussion started by: shashi792
0 Replies
6. Shell Programming and Scripting
Hello,
I am trying to merge data from two text files. One file (File1) contains a listing of data which includes the trial number in Column 5, while the other text file (File2) contains what category the trial belongs to.
Here is a snippet of what File1 looks like.
1 Arrow_ST 9.738 0.905... (2 Replies)
Discussion started by: Jahn
2 Replies
7. Shell Programming and Scripting
I have two awk scripts shown below. checkTrvt.awk works on file format .xt, whereas checkData.awk workds on file format .dat
I want to merge the two scripts together, if I find that the user passed .xt file I do the code for .xt file, whereas if user passes .dat file, I go through the code for... (9 Replies)
Discussion started by: kristinu
9 Replies
8. Shell Programming and Scripting
Hi,
How I can merge two file columns such as the followings using awk:
file 1
2 3
2 2
1 1
file 2
4 3
4 5
7 6
Result:
2 3 4 3
2 2 4 5
1 1 7 6
This is an example, at the end, I will have about 25 files that I want to merge them, it is important for me that the order in the... (7 Replies)
Discussion started by: Homa
7 Replies
9. Shell Programming and Scripting
Hello,
I have a data format as follows:
Ind1 0 1 2
Ind1 0 2 1
Ind2 1 1 0
Ind2 2 2 0
I want to use AWK to have this output:
Ind1 00 12 21
Ind2 12 12 00
That is to merge each two rows with the same row names.
Thank you very much in advance for your help. (8 Replies)
Discussion started by: Homa
8 Replies
10. Shell Programming and Scripting
I just tried following
ls *.dat|sort -t"_" -k2n,2|while read f1 && read f2; do
awk '{print}' $f1
awk FNR==1'{print $1,$2,$3,$4,$5,"*","*","*" }' OFS="\t" $f2
awk '{print}' $f2
donegot following result
18-Dec-1983 11:45:00 AM 18.692 84.672 0 25.4 24
18-Dec-1983 ... (3 Replies)
Discussion started by: Akshay Hegde
3 Replies
LEARN ABOUT PHP
stream_socket_recvfrom
STREAM_SOCKET_RECVFROM(3) 1 STREAM_SOCKET_RECVFROM(3)
stream_socket_recvfrom - Receives data from a socket, connected or not
SYNOPSIS
string stream_socket_recvfrom (resource $socket, int $length, [int $flags], [string &$address])
DESCRIPTION
stream_socket_recvfrom(3) accepts data from a remote socket up to $length bytes.
PARAMETERS
o $socket
- The remote socket.
o $length
- The number of bytes to receive from the $socket.
o $flags
- The value of $flags can be any combination of the following:
Possible values for $flags
+------------+---------------------------------------------------+
| | |
|STREAM_OOB | |
| | |
| | Process OOB ( out-of-band) data. |
| | |
| | |
|STREAM_PEEK | |
| | |
| | Retrieve data from the socket, but do not con- |
| | sume the buffer. Subsequent calls to fread(3) or |
| | stream_socket_recvfrom(3) will see the same data. |
| | |
+------------+---------------------------------------------------+
o $address
- If $address is provided it will be populated with the address of the remote socket.
RETURN VALUES
Returns the read data, as a string
EXAMPLES
Example #1
stream_socket_recvfrom(3) example
<?php
/* Open a server socket to port 1234 on localhost */
$server = stream_socket_server('tcp://127.0.0.1:1234');
/* Accept a connection */
$socket = stream_socket_accept($server);
/* Grab a packet (1500 is a typical MTU size) of OOB data */
echo "Received Out-Of-Band: '" . stream_socket_recvfrom($socket, 1500, STREAM_OOB) . "'
";
/* Take a peek at the normal in-band data, but don't comsume it. */
echo "Data: '" . stream_socket_recvfrom($socket, 1500, STREAM_PEEK) . "'
";
/* Get the exact same packet again, but remove it from the buffer this time. */
echo "Data: '" . stream_socket_recvfrom($socket, 1500) . "'
";
/* Close it up */
fclose($socket);
fclose($server);
?>
NOTES
Note
If a message received is longer than the $length parameter, excess bytes may be discarded depending on the type of socket the mes-
sage is received from (such as UDP).
Note
Calls to stream_socket_recvfrom(3) on socket-based streams, after calls to buffer-based stream functions (like fread(3) or
stream_get_line(3)) read data directly from the socket and bypass the stream buffer.
SEE ALSO
stream_socket_sendto(3), stream_socket_client(3), stream_socket_server(3).
PHP Documentation Group STREAM_SOCKET_RECVFROM(3)