Hi ahamed,
results are more possible bus still not there..
I know that max should be over 160 and min around 40-50.
@Birei script is working on a smaller files but with the bigger files it doesn't work.
Maybe the problem is that some lines have 4digit values in the 5th column - like this?
Hello every one, I have following data
***CAMPAIGN 1998 CONTRIBUTIONS***
---------------------------------------------------------------------------
NAME PHONE Jan | Feb | Mar | Total Donated
... (12 Replies)
How can I extract few lines(like 10 to 15, top 10 and last 10) from a file using perl.
I do it with sed, head and tail in unix scripting. I am new to perl. Appreciate your help. (2 Replies)
hi, i have an awk script and I managed to figure out how to search the max value but Im having difficulty in searching for the min field value.
BEGIN {FS=","; max=0}
NF == 7 {if (max < $6) max = $6;}
END { print man, min}
where $6 is the column of a field separated by a comma (3 Replies)
I'm trying to iterate a UNIX awk script that returns min/max temperature data for each day from a monthly weather data file (01_weath.dat). The temperature data is held in $5. The temps are reported each minute so each day contains 1440 temperature enteries. The below code has gotten me as far as... (5 Replies)
I am trying to print 1st, 2nd, 13th and 14th fields of a file of line numbers from 29 to 10029. I dont know how to put this in one code. Currently I am removing the selected lines by
awk 'NR==29,NR==10029' File1 > File2
and then doing
awk '{print $1, $2, $13, $14}' File2 > File3
Can... (3 Replies)
Hi guys,
I already search on the forum but i can't solve this on my own.
I have a lot of files like this:
And i need to print the line with the maximum value in last column but if the value is the same (2 in this exemple for the 3 last lines) i need get the line with the minimum value in... (4 Replies)
aaa: 3 ms
aaa: 2 ms
aaa: 5 ms
aaa: 10 ms
..........
to get the 3 2 5 10 ...'s min avg and max
something like
min: 2 ms avg: 5 ms max: 10 ms (2 Replies)
I need to find the max/min of columns 1 and 2 of a 2 column file what contains the special character ">".
I know that this will find the max value of column 1.
awk 'BEGIN {max = 0} {if ($1>max) max=$1} END {print max}' input.file
But what if I needed to ignore special characters in the... (3 Replies)
Hi,
I need your kind help to get min and max values from file based on value in $5 .
File1
SP12.3 stc 2240806 2240808 + ID1_N003 ID2_N003T0
SP12.3 sto 2241682 2241684 + ID1_N003 ID2_N003T0
SP12.3 XE 2239943 2240011 + ID1_N003 ID2_N003T0
SP12.3 XE 2240077 2241254 + ID1_N003 ... (12 Replies)
BALLS(1) General Commands Manual BALLS(1)NAME
balls - preprocessor for space-filling models in Raster3D molecular graphics package
SYNOPSIS
balls [-h]
Balls reads a file describing atom colours and/or a PDB coordinate file and produces a file containing Raster3D descriptor records for each
atom in the input file. The file produced by balls may be fed directly to render or it may be combined with descriptor files produced by
other Raster3D utilities.
EXAMPLES
To describe a simple space-filling model coloured by residue type:
cat mycolours.pdb protein.pdb | balls | render > mypicture.png
To include a pre-selected view matrix with the same model:
cp view1.matrix setup.matrix
cat mycolours.pdb protein.pdb | balls | render > mypicture.png
To prepend header records describing a pre-selected scale and view:
cat mycolours.pdb protein.pdb | balls -h > balls.r3d
cat header.r3d balls.r3d | render > mypicture.png
OPTIONS -h
Suppress header records in output. By default balls will produce an output file which starts with header records containing a default set
of scaling and processing options. The -h flag will suppress these header records so that the output file contains only sphere descrip-
tors. This option is useful for producing files which describe only part of a scene, and which are to be later combined with descriptor
files produced by other programs.
DESCRIPTION
The input to balls consists of a single text file containing colour information and atomic coordinates in PDB data bank format. Coordi-
nates are output as Raster3D descriptor records with colours and sphere radii assigned according to the COLO records described below. By
default atoms are assigned CPK colours. By default the output file contains a set of header records as required by the render program.
The header is constructed to include a TMAT matrix corresponding to the transformation matrix contained in file setup.matrix (if it
exists), or to the Eulerian angles contained in file setup.angles (if it exists).
Colours are assigned to atoms using a matching process, using COLOUR records prepended to the input PDB file. Raster3D uses a pseudo-PDB
record type with with COLO in the first 4 columns:
Columns
1 - 4 COLO
7 - 30 Mask (described below)
31 - 38 Red component
39 - 46 Green component
47 - 54 Blue component
55 - 60 van der Waals radius in Angstroms
61 - 80 Comments
Note that the Red, Green, and Blue components are in the same positions as the X, Y, and Z components of an ATOM or HETA record, and the
van der Waals radius goes in place of the Occupancy. The Red, Green, and Blue components must all be in the range 0 to 1.
The Mask field is used in the matching process as follows. First the program reads in and stores all the ATOM, HETA, and COLOUR records in
input order. Then it goes through each stored ATOM/HETA record in turn, and searches for a COLOUR record that matches the ATOM/HETA record
in all of columns 7 through 30. The first such COLOUR record to be found determines the colour and radius of the atom.
In order that one COLOUR record can provide colour and radius specifications for more than one atom (e.g., based on residue or atom type,
or any other criterion for which labels can be given somewhere in columns 7 through 30), the "#" symbol is used as a wildcard. I.e. a # in
a COLOUR record matches any character in the corresponding column in an ATOM or HETA record. All other characters must match literally to
count as a match. Note that the very last COLO record in the input should have # symbols in all of columns 7 through 30 in order to pro-
vide a colour for any atom whose ATOM/HETA record fails to match any previous COLOUR record. This idea of matching masks for colour speci-
fications is due to Colin Broughton.
Several files of COLOUR records, including one based on Bob Fletterick's "Shapely Models" and another mimicking CPK model parts, are pro-
vided as samples.
ENVIRONMENT
The files setup.matrix and setup.angles, if they exist, affect the
header records produced by balls.
SOURCE
anonymous ftp site:
ftp.bmsc.washington.edu
web URL:
http://www.bmsc.washington.edu/raster3d/raster3d.html
contact:
Ethan A Merritt
University of Washington, Seattle WA 98195
merritt@u.washington.edu
SEE ALSO
render(l), rods(l), ribbon(l)
AUTHORS
Originally written by David J Bacon and Wayne F Anderson.
Extensions and revisions by Ethan A Merritt.
Raster3D 8 May 1999 BALLS(1)