Sponsored Content
Top Forums Shell Programming and Scripting Data reformat and rearrangement problem asking Post 302583196 by cpp_beginner on Monday 19th of December 2011 11:44:53 PM
Old 12-20-2011
For the column 1 and column 2, I would like to print out the top 2 hit of "general_process", column 3 and column 4, I would like to print out the top 2 hit of "data_rearrangement", column 5 and column 6, I would like to print out the top 2 hit of "component", column 7 and column 8, I would like to print out the top 2 hit of "-"
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

help reformat data with awk

I am trying to write an awk program to reformat a data table and convert the date to julian time. I have all the individual steps working, but I am having some issues joing them into one program. Can anyone help me out? Here is my code so far: # This is an awk program to convert the dates from... (4 Replies)
Discussion started by: climbak
4 Replies

2. Shell Programming and Scripting

Reformat Data (Perl)

I am new to Perl. I need to reformat a data file as the last part of a script I am working on. I am stuck on this. Here is the current format: CUSTOMER Filename 09/04/07-08:49 CUSTOMER Filename 09/04/07-08:52 CUSTOMER Filename 09/04/07-08:52 CUSTOMER2 Filename 09/04/07-08:49 CUSTOMER2... (3 Replies)
Discussion started by: flood
3 Replies

3. Shell Programming and Scripting

reformat data with a shell script

Can anyone help me with a shell script that can do the following: I have a data in fasta format (first line is the header, followed by a sequence of characters). >ALLLY GGCCCCTCGAGCCTCGAACCGGAACCTCCAAATCCGAGACGCTCTGCTTATGAGGACCTC GAAATATGCCGGCCAGTGAAAAAATCTTGTGGCTTTGAGGGCTTTTGGTTGGCCAGGGGC... (5 Replies)
Discussion started by: manishabh
5 Replies

4. Shell Programming and Scripting

Rearrangement of data content problem

Input data: >sample_1 WETYUPVLGK DGGHHHWETY QPERTTGGLO >sample_2 WRRTTOOLLP MKMKNJUTYE DLGLTTOC . . Desired output: >sample_1 WETYUP VLGKDG GHHHWE (8 Replies)
Discussion started by: patrick87
8 Replies

5. Shell Programming and Scripting

Reformat the data of a file.

I have a file which have data like A.txt a 1Jan I am in a1. 1Jan I was born. 2Jan I am here. 3Jan I am in a3. b 1Jan I am in b1. c 2Jan I am in c2. d 2Jan I am in d2. 5jan I am in d5. date in the file might be vary evertime. (9 Replies)
Discussion started by: samkhu
9 Replies

6. Shell Programming and Scripting

Help with reformat data content

input file: hsa-miR-4726-5p Score hsa-miR-483-5p Score hsa-miR-125b-2* Score hsa-miR-4492 hsa-miR-4508 hsa-miR-4486 Score Desired output file: hsa-miR-4726-5p Score hsa-miR-483-5p Score hsa-miR-125b-2* Score hsa-miR-4492 hsa-miR-4508 hsa-miR-4486 Score ... (6 Replies)
Discussion started by: perl_beginner
6 Replies

7. Shell Programming and Scripting

Help with reformat input data

Input file: 58227131 50087390 57339526 40578034 65348841 55614853 64363217 44178559 Desired output file: 58227131 50087390 57339526 40578034 65348841 55614853 64363217 44178559 Command that I try: (4 Replies)
Discussion started by: perl_beginner
4 Replies

8. Shell Programming and Scripting

Help with data rearrangement based on share same content

Input file data_2 USA data_2 JAPAN data_3 UK data_4 Brazil data_5 Singapore data_5 Indo data_5 Thailand data_6 China Desired output file data_2 USA/JAPAN data_3 UK data_4 Brazil data_5 Singapore/Indo/Thailand data_6 China I would like to merge all data content that share same... (2 Replies)
Discussion started by: perl_beginner
2 Replies

9. Shell Programming and Scripting

Help with reformat data structure

Input file: bv|111259484|pir||T49736_real_data bv|159484|pir||T9736_data_figure bv|113584|prf|T4736|truth bv|113584|pir||T4736_truth Desired output: bv|111259484|pir|T49736|real_data bv|159484|pir|T9736|data_figure bv|113584|prf|T4736|truth bv|113584|pir|T4736|truth Once the... (8 Replies)
Discussion started by: perl_beginner
8 Replies

10. Shell Programming and Scripting

Help with reformat data set

Input file 4CL1 O24145 CoA1 4CL1 P31684 CoA1 4CL1 Q54P77 CoA_1 73 O36421 Unknown 4CL3 Q9S777 coumarate 4CL3 Q54P79 coumarate 4CL3 QP7932 coumarate Desired output result 4CL1 O24145#P31684 CoA1 4CL1 Q54P77 CoA_1 73 O36421 Unknown 4CL3 Q9S777#Q54P79#QP7932 coumarate I... (5 Replies)
Discussion started by: perl_beginner
5 Replies
Graph(3pm)						User Contributed Perl Documentation						Graph(3pm)

NAME
SVG::Graph - Visualize your data in Scalable Vector Graphics (SVG) format. SYNOPSIS
use SVG::Graph; use SVG::Graph::Data; use SVG::Graph::Data::Datum; #create a new SVG document to plot in... my $graph = SVG::Graph->new(width=>600,height=>600,margin=>30); #and create a frame to hold the data/glyphs my $frame = $graph->add_frame; #let's plot y = x^2 my @data = map {SVG::Graph::Data::Datum->new(x=>$_,y=>$_^2)} (1,2,3,4,5); my $data = SVG::Graph::Data->new(data => @data); #put the xy data into the frame $frame->add_data($data); #add some glyphs to apply to the data in the frame $frame->add_glyph('axis', #add an axis glyph 'x_absolute_ticks' => 1, #with ticks every one #unit on the x axis 'y_absolute_ticks' => 1, #and ticks every one #unit on the y axis 'stroke' => 'black', #draw the axis black 'stroke-width' => 2, #and 2px thick ); $frame->add_glyph('scatter', #add a scatterplot glyph 'stroke' => 'red', #the dots will be outlined #in red, 'fill' => 'red', #filled red, 'fill-opacity' => 0.5, #and 50% opaque ); #print the graphic print $graph->draw; DESCRIPTION
SVG::Graph is a suite of perl modules for plotting data. SVG::Graph currently supports plots of one-, two- and three-dimensional data, as well as N-ary rooted trees. Data may be represented as: Glyph Name Dimensionality supported 1d 2d 3d tree -------------------------------------------------------- Axis x Bar Graph x Bubble Plot x Heatmap Graph x Line Graph x Pie Graph x Scatter Plot x Spline Graph x Tree x SVG::Graph 0.02 is a pre-alpha release. Keep in mind that many of the glyphs are not very robust. PLOTTING
You need to create a SVG::Graph::Frame instance from the parent SVG::Graph instance for each set of data to be plotted. Datasets can be hierarchical, and to represent this, SVG::Graph::Frame instances can themselves contain subframes. SVG::Graph::Frame can contain: - multiple subframes as instances of SVG::Graph::Frame - a single SVG::Graph::Data instance - multiple SVG::Graph::Glyph instances with which to render the attached SVG::Graph::Data instance, and all SVG::Graph::Data instances attached to SVG::Graph::Frame subinstances See SVG::Graph::Frame and SVG::Graph::Glyph for details. ONE DATA SET 1. create an SVG::Graph instance 2. create an SVG::Graph::Frame instance by calling SVG::Graph::add_frame(); 3. create an SVG::Graph::Data instance, containing an SVG::Graph::Data::Datum instance for each data point. 4. Attach the SVG::Graph::Data instance to your SVG::Graph::Frame using SVG::Graph::Frame::add_data(); 5. Attach glyphs to the SVG::Graph::Frame instance using SVG::Graph::Frame::add_glyph(); 6. Call SVG::Graph::draw(); MULTIPLE DATA SETS 1. create an SVG::Graph instance 2. create an SVG::Graph::Frame instance by calling SVG::Graph::add_frame(); 3. create an SVG::Graph::Data instance, containing an SVG::Graph::Data::Datum instance for each data point. 4. Attach the SVG::Graph::Data instance to your SVG::Graph::Frame using SVG::Graph::Frame::add_data(); 5. Attach glyphs to the SVG::Graph::Frame instance using SVG::Graph::Frame::add_glyph(); 6. repeat [2-5] for each additional data set to be added. add_frame() can be called on SVG::Graph to add top-level data sets, or SVG::Graph::Frame to add hierarchical data sets. 7. Call SVG::Graph::draw(); FEEDBACK
Send an email to the svg-graph-developers list. For more info, visit the project page at http://www.sf.net/projects/svg-graph AUTHORS
Allen Day, <allenday@ucla.edu> Chris To, <crsto@ucla.edu> CONTRIBUTORS
James Chen, <chenj@seas.ucla.edu> Brian O'Connor, <boconnor@ucla.edu> SEE ALSO
SVG METHODS
new Title : new Usage : my $graph = SVG::Graph->new(width=>600, height=>600, margin=>20); Function: creates a new SVG::Graph object Returns : a SVG::Graph object Args : width => the width of the SVG height => the height of the SVG margin => margin for the root frame init Title : init Usage : Function: Example : Returns : Args : width Title : width Usage : $obj->width($newval) Function: Example : Returns : value of width (a scalar) Args : on set, new value (a scalar or undef, optional) height Title : height Usage : $obj->height($newval) Function: Example : Returns : value of height (a scalar) Args : on set, new value (a scalar or undef, optional) margin Title : margin Usage : $obj->margin($newval) Function: Example : Returns : value of margin (a scalar) Args : on set, new value (a scalar or undef, optional) svg Title : svg Usage : $obj->svg($newval) Function: Example : Returns : value of svg (a scalar) Args : on set, new value (a scalar or undef, optional) add_frame Title : add_frame Usage : my $frame = $graph->add_frame Function: adds a Frame to the current Graph Returns : a SVG::Graph::Frame object Args : a hash. usable keys: frame_transform (optional) 'top' default orientation 'bottom' rotates graph 180 deg (about the center) 'right' points top position towards right 'left' points top position towards left frames Title : frames Usage : get/set Function: Example : Returns : Args : xoffset Title : xoffset Usage : $obj->xoffset($newval) Function: Example : Returns : value of xoffset (a scalar) Args : on set, new value (a scalar or undef, optional) yoffset Title : yoffset Usage : $obj->yoffset($newval) Function: Example : Returns : value of yoffset (a scalar) Args : on set, new value (a scalar or undef, optional) draw Title : draw Usage : $graph=>draw Function: depends on child glyph implementations Returns : xmlifyied SVG object Args : none perl v5.10.0 2009-01-07 Graph(3pm)
All times are GMT -4. The time now is 06:25 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy