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Randomising text files
Post 302581975 by PerlNutt on Wednesday 14th of December 2011 03:04:17 PM
12-14-2011
Randomising text files
Hey guys!
So I have, say, 1000 text files in a directory, and I have to make a text file using their contents, so it has to have the equivalent of 1000 text files in it, but it has to be done randomly, with replacement. So file5 could go in 50 times and file368 might not go in at all. I hope I made that clear.
Anyone have any ideas about it? Linux ins't my strong point
Thank you
So I have, say, 1000 text files in a directory, and I have to make a text file using their contents, so it has to have the equivalent of 1000 text files in it, but it has to be done randomly, with replacement. So file5 could go in 50 times and file368 might not go in at all. I hope I made that clear.
Anyone have any ideas about it? Linux ins't my strong point
Thank you
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LEARN ABOUT DEBIAN
dotur
Dotur(1) General Commands Manual Dotur(1) NAME
dotur - A program for calculating descriptive statistics for sequence libraries SYNOPSIS
dotur [-i Iterations (<1000>)] [-c ClusterMethod (<f>, n, a)] [-p Precision (10, <100>, 1000, 10000)] [-l] [-j] <file> OPTIONS
-i: Number of iterations (default = 1000) -c: Clustering method - (f) furthest neighbor, (n) nearest neighbor, (a) average neighbor (default = f) -p: Precision of distances for output, increasing can dramatically lengthen execution times - 10, 100, 1000, 10000 (default = 100) -l: Input file is lower triangular (default = square matrix) -r: Calculates rarefaction curves for each parameter, can dramatically lengthen execution times. Simple rarefaction curve always calcu- lated. -stop: Stops clustering when cutoff has been reached. -wrep: Samples with replacement. -jumble: Jumble the order of the distance matrix. -sim: Converts similarity score to distance (D=1-S). DESCRIPTION
This is the Debian GNU/Linux version of dotur. DOTUR is a computer program that takes a distance matrix describing the genetic distance between DNA sequence data and assigns sequences to operational taxonomic units (OTUs) using either the furthest, average, or nearest neighbor algorithms for all possible distances that can be described using the distance matrix. Using the OTU composition data, DOTUR constructs collector's and rarefaction curves for sampling intensity, richness estimators, and diversity indices. AUTHOR
This manual page was compiled from the package description and the output of help2man by Thorsten Alteholz <debian@alteholz.de>, for the Debian GNU/Linux system (but may be used by others). DOTUR
June 03, 2011 Dotur(1)