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Full Discussion: Trouble Assigning AWK variables
Top Forums UNIX for Dummies Questions & Answers Trouble Assigning AWK variables Post 302579374 by wyarosh on Monday 5th of December 2011 02:45:23 PM
Old 12-05-2011
@Corona688 I can't seem to get it to work. It gives me this output.

Code:
variableStep 0 span=25
201     1.0000
226     0.5556
251     0.2033
276     0.1238
301     0.1087
326     0.1238
351     0.1799
376     0.2632
401     0.5000


I also noticed a problem with my previous program. The data it outputs is correct, but for some reason the new file has fields separated by spaces, not tab. I'm trying to figure out how to take this code.

Code:
echo Enter the name of the file without the .wig
read NAME
echo the ratio?
read ratio
awk -v ratio=$ratio '{if($1 == "variableStep") {print $0} else {$2*=ratio;{print $0}}}' ${NAME}.wig > ${NAME}normalized.wig

and have it make a new file with fields that are tab separated, not space.





---------- Post updated at 02:45 PM ---------- Previous update was at 02:40 PM ----------

@Corona668 I changed the == to != and it seems to be computing everything correctly now, but again its giving me a space separated set of fields and I need them to be tab separated.

Code:
variableStep chrom=Uextra span=25
201 0.5952
226 0.330693
251 0.121004
276 0.0736858
301 0.0646982
326 0.0736858
351 0.107076
376 0.156657

Last edited by radoulov; 12-05-2011 at 04:24 PM..
 

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LEARN ABOUT OPENSOLARIS

iconv_koi8-r

iconv_koi8-r(5)                                         Standards, Environments, and Macros                                        iconv_koi8-r(5)

NAME

       iconv_koi8-r - code set conversion tables for KOI8-R

DESCRIPTION

       The following code set conversions are supported:

       +-------------------------------------------------------------------------+
       |                     Code Set Conversions Supported                      |
       +--------------+--------+--------------+--------+-------------------------+
       |    Code      |Symbol  |Target Code   |Symbol  |      Target Output      |
       +--------------+--------+--------------+--------+-------------------------+
       |KOI8-R        |koi8    |ISO 8859-5    |iso5    | ISO 8859-5 Cyrillic     |
       +--------------+--------+--------------+--------+-------------------------+
       |KOI8-R        |koi8    |PC Cyrillic   |alt     | Alternative PC Cyrillic |
       +--------------+--------+--------------+--------+-------------------------+
       |KOI8-R        |koi8    |MS 1251       |win5    | Windows Cyrillic        |
       +--------------+--------+--------------+--------+-------------------------+
       |KOI8-R        |koi8    |Mac Cyrillic  |mac     | Macintosh Cyrillic      |
       +--------------+--------+--------------+--------+-------------------------+

CONVERSIONS

       The conversions are performed according to the following tables. All values in the tables are given in octal.

   KOI8-R to ISO 8859-5
       For the conversion of KOI8-R to ISO 8859-5, all characters not in the following table are mapped unchanged.

       +-----------------------------------------------------------------+
       |               |     Conversions|Performed       |               |
       |    KOI8-R     |  ISO 8859-5    |    KOI8-R      |  ISO 8859-5   |
       |24             | 4              |320             |337            |
       |241            | 362            |321             |357            |
       |242            | 363            |322             |340            |
       |243            | 361            |323             |341            |
       |244            | 364            |324             |342            |
       |245            | 365            |325             |343            |
       |246            | 366            |327             |322            |
       |247            | 367            |330             |354            |
       |250            | 370            |331             |353            |
       |251            | 371            |332             |327            |
       |252            | 372            |333             |350            |
       |253            | 373            |334             |355            |
       |254            | 374            |335             |351            |
       |256            | 376            |336             |347            |
       |257            | 377            |337             |352            |
       |260            | 360            |340             |316            |
       |261            | 242            |341             |260            |
       |262            | 243            |342             |261            |
       |263            | 241            |343             |306            |
       |264            | 244            |344             |264            |
       |265            | 245            |345             |265            |
       |266            | 246            |346             |304            |
       |267            | 247            |347             |263            |
       |270            | 250            |350             |305            |
       |271            | 251            |351             |270            |
       |272            | 252            |352             |271            |
       |273            | 253            |353             |272            |
       |274            | 254            |354             |273            |
       |275            | 255            |355             |274            |
       |276            | 256            |356             |275            |
       |277            | 257            |357             |276            |
       |300            | 356            |360             |277            |
       |301            | 320            |361             |317            |
       |302            | 321            |362             |300            |
       |303            | 346            |363             |301            |
       |304            | 324            |364             |302            |
       |305            | 325            |365             |303            |
       |306            | 344            |366             |266            |
       |307            | 323            |367             |262            |
       |310            | 345            |370             |314            |
       |311            | 330            |371             |313            |
       |312            | 331            |372             |267            |
       |313            | 332            |373             |310            |
       |314            | 333            |374             |315            |
       |315            | 334            |375             |311            |
       |316            | 335            |376             |307            |
       |317            | 336            |                |               |
       +---------------+----------------+----------------+---------------+

   KOI8-R to PC Cyrillic
       For the conversion of KOI8-R to PC Cyrillic, all characters not in the following table are mapped unchanged.

       +-----------------------------------------------------------------+
       |               |     Conversions|Performed       |               |
       |    KOI8-R     |  PC Cyrillic   |    KOI8-R      | PC Cyrillic   |
       |24             | 4              |333             |350            |
       |200-242        | 40             |334             |355            |
       |243            | 361            |335             |351            |
       |244-254        | 40             |336             |347            |
       |255            | 260            |337             |352            |
       |256-262        | 40             |340             |236            |
       |263            | 360            |341             |200            |
       |264-274        | 40             |342             |201            |
       |275            | 260            |343             |226            |
       |276-277        | 40             |344             |204            |
       |300            | 356            |345             |205            |
       |301            | 240            |346             |224            |
       |302            | 241            |347             |203            |
       |303            | 346            |350             |225            |
       |304            | 244            |351             |210            |
       |305            | 245            |352             |211            |
       |306            | 344            |353             |212            |
       |307            | 243            |354             |213            |
       |310            | 345            |355             |214            |
       |311            | 250            |356             |215            |
       |312            | 251            |357             |216            |
       |313            | 252            |360             |217            |
       |314            | 253            |361             |237            |
       |315            | 254            |362             |220            |
       |316            | 255            |363             |221            |
       |317            | 256            |364             |222            |
       |320            | 257            |365             |223            |
       |321            | 357            |366             |206            |
       |322            | 340            |367             |202            |
       |323            | 341            |370             |234            |
       |324            | 342            |371             |233            |
       |325            | 343            |372             |207            |
       |326            | 246            |373             |230            |
       |327            | 242            |374             |235            |
       |330            | 354            |375             |231            |
       |331            | 353            |376             |227            |
       |332            | 247            |                |               |
       +---------------+----------------+----------------+---------------+

   KOI8-R to MS 1251
       For the conversion of KOI8-R to MS 1251, all characters not in the following table are mapped unchanged.

       +-----------------------------------------------------------------+
       |               |     Conversions|Performed       |               |
       |    KOI8-R     |    MS 1251     |    KOI8-R      |   MS 1251     |
       |24             | 4              |317             |356            |
       |200-237        | 40             |320             |357            |
       |241            | 220            |321             |377            |
       |242            | 203            |322             |360            |
       |243            | 270            |323             |361            |
       |244            | 272            |324             |362            |
       |245            | 276            |325             |363            |
       |246            | 263            |326             |346            |
       |247            | 277            |327             |342            |
       |250            | 274            |330             |374            |
       |251            | 232            |331             |373            |
       |252            | 234            |332             |347            |
       |253            | 236            |333             |370            |
       |254            | 235            |334             |375            |
       |255            | 210            |335             |371            |
       |256            | 242            |336             |367            |
       |257            | 237            |337             |372            |
       |260            | 271            |340             |336            |
       |261            | 200            |341             |300            |
       |262            | 201            |342             |301            |
       |263            | 250            |343             |326            |
       |264            | 252            |344             |304            |
       |265            | 275            |345             |305            |
       |266            | 262            |346             |324            |
       |267            | 257            |347             |303            |
       |270            | 243            |350             |325            |
       |271            | 212            |351             |310            |
       |272            | 214            |352             |311            |
       |273            | 216            |353             |312            |
       |274            | 215            |354             |313            |
       |275            | 210            |355             |314            |
       |276            | 241            |356             |315            |
       |277            | 217            |357             |316            |
       |300            | 376            |360             |317            |
       |301            | 340            |361             |337            |
       |302            | 341            |362             |320            |
       |303            | 366            |363             |321            |
       |304            | 344            |364             |322            |
       |305            | 345            |365             |323            |
       |306            | 364            |366             |306            |
       |307            | 343            |367             |302            |
       |310            | 365            |370             |334            |
       |311            | 350            |371             |333            |
       |312            | 351            |372             |307            |
       |313            | 352            |373             |330            |
       |314            | 353            |374             |335            |
       |315            | 354            |375             |331            |
       |316            | 355            |376             |327            |
       |376            | 227            |                |               |
       +---------------+----------------+----------------+---------------+

   KOI8-R to Mac Cyrillic
       For the conversion of KOI8-R to Mac Cyrillic, all characters not in the following table are mapped unchanged.

       +-----------------------------------------------------------------+
       |               |     Conversions|Performed       |               |
       |    KOI8-R     | Mac Cyrillic   |    KOI8-R      | Mac Cyrillic  |
       |24             | 4              |317             |356            |
       |200-237        | 40             |320             |357            |
       |240            | 312            |321             |337            |
       |241            | 254            |322             |360            |
       |242            | 257            |323             |361            |
       |243            | 336            |324             |362            |
       |244            | 271            |325             |363            |
       |245            | 317            |326             |346            |
       |246            | 264            |327             |342            |
       |247            | 273            |330             |374            |
       |250            | 300            |331             |373            |
       |251            | 275            |332             |347            |
       |252            | 277            |333             |370            |
       |253            | 40             |334             |375            |
       |254            | 316            |335             |371            |
       |255            | 40             |336             |367            |
       |256            | 331            |337             |372            |
       |257            | 333            |340             |236            |
       |260            | 334            |341             |200            |
       |261            | 253            |342             |201            |
       |262            | 256            |343             |226            |
       |263            | 335            |344             |204            |
       |264            | 270            |345             |205            |
       |265            | 301            |346             |224            |
       |266            | 247            |347             |203            |
       |267            | 272            |350             |225            |
       |270            | 267            |351             |210            |
       |271            | 274            |352             |211            |
       |272            | 276            |353             |212            |
       |273            | 40             |354             |213            |
       |274            | 315            |355             |214            |
       |275            | 40             |356             |215            |
       |276            | 330            |357             |216            |
       |277            | 332            |360             |217            |
       |300            | 376            |361             |237            |
       |301            | 340            |362             |220            |
       |302            | 341            |363             |221            |
       |303            | 366            |364             |222            |
       |304            | 344            |365             |223            |
       |305            | 345            |366             |206            |
       |306            | 364            |367             |202            |
       |307            | 343            |370             |234            |
       |310            | 365            |371             |233            |
       |311            | 350            |372             |207            |
       |312            | 351            |373             |230            |
       |313            | 352            |374             |235            |
       |314            | 353            |375             |231            |
       |315            | 354            |376             |227            |
       |316            | 355            |                |               |
       +---------------+----------------+----------------+---------------+

FILES

       /usr/lib/iconv/*.so             conversion modules

       /usr/lib/iconv/*.t              conversion tables

       /usr/lib/iconv/iconv_data       list of conversions supported by conversion tables

SEE ALSO

       iconv(1), iconv(3C), iconv(5)

SunOS 5.10                                                          18 Apr 1997                                                    iconv_koi8-r(5)
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