Login or Register to Ask a Question and Join Our Community

Sponsored Content
Full Discussion: Subtracting values from 2 columns in a file
Top Forums UNIX for Dummies Questions & Answers Subtracting values from 2 columns in a file Post 302567499 by jayan_jay on Monday 24th of October 2011 10:26:57 AM
Old 10-24-2011
To fulfill wolf request, modified ranga's code
Code:
$ nawk '{a=$5-$4;print $0,a}' infile | sort +5nr | nawk '!x[$1]++'
A2LD1 chr13 - 101182417 101241046 58629
A2ML1 chr12 + 8975149 9029377 54228
A2M chr12 - 9220303 9268558 48255
A1BG chr19 - 58858171 58864865 6694

This User Gave Thanks to jayan_jay For This Post:
wolf_blue
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

comparing files - adding/subtracting/formating columns

I have two files: file1.txt: FS Total Used Free Used% /u01 10000 8000 2000 80% /u02 10000 8000 2000 80% /u03 10000 8000 2000 80% /u04 10000 8000 2000 80% /u05 10000 8000 2000 80% /u06 10000 8000 2000 80% /u07 10000 8000 2000 80% /u10 10000 5000 5000 50% file2.txt:... (7 Replies)
Discussion started by: oabdalla
7 Replies

2. Shell Programming and Scripting

Subtracting columns against each other

Hi All, I have a file of 100 lines of each having 1000 columns. I need to find the difference of each column against each other. That means, Col1-Col1; Col1-Col2; Col1-Col3;......Col1-Col1000; Col2-Col1; Col2-Col2; Col2-Col3;.... and so on ....up to Col1000-Col1000. Lets say the file is... (6 Replies)
Discussion started by: Fredrick
6 Replies

3. UNIX for Dummies Questions & Answers

combine the values from the first two columns within a file

Hello everybody, I have a text file containing 10,000 rows and 5000 columns. The values are separated by a tab. Ex. file_ex.ped 1 mike 0 0 2 1 A A G G C T A G 1 jack 0 0 2 2 T A G T C A A C 1 Mary 0 0 1 2 A T G C A T G C ... I would like a out put file 1 mike 0 0 2 1 AA GG CT AG 1... (7 Replies)
Discussion started by: Unilearn
7 Replies

4. Shell Programming and Scripting

Math operations with file columns values.

Hello everybody, I have some large files containing statistical data. The data is stored in the following generic format: >cat my_file 1, 2, 3 1, 2, 3 1, 2, 3 > The values of columns no.2 and 3 are expressed in bytes. I would like to transform them in Megabytes, by dividing them with... (3 Replies)
Discussion started by: fabian23
3 Replies

5. Shell Programming and Scripting

Copy values from columns matching in those in second file.

Hi All, I have two sets of files. Set 1: 100 text files with extension .txt with names like 1.txt, 2.txt, 3.txt until 100.txt Set 2: One big file with extension .dat The text files have some records in columns like this: 0.7316431 82628 0.7248189 82577 0.7248182 81369 0.7222999... (1 Reply)
Discussion started by: shoaibjameel123
1 Replies

6. UNIX for Dummies Questions & Answers

Removing columns from a text file that do not have any values in second and third columns

I have a text file that has three columns. But at the end of the text file, there are trailing lines that have missing second and third columns: 4 0.04972604 KLHL28 4 0.0497332 CSTB 4 0.04979822 AIF1 4 0.04983331 DECR2 4 0.04990344 KATNB1 4 4 4 4 How can I remove the trailing... (3 Replies)
Discussion started by: evelibertine
3 Replies

7. Shell Programming and Scripting

Searching columns and subtracting values in awk

Hi everyone, I had a similar question a couple days ago but my problem has gotten significantly (to me anyway) more complex. I have two files: File 1: 0808 166 166 62 9 0 1000fights 1 1 2 1 0 100places2visit 2 2 2 2 0 10veronica91 167 167 3 1 0 11thgorgeous 346 346 3806 1461 122... (2 Replies)
Discussion started by: collards
2 Replies

8. Shell Programming and Scripting

Subtracting values from variable

Legends, Please help me in , how do i subtract the variable values listed like below. the first value of orig should be subtracted from first value of prev and so on. san> echo $orig 346 316 340 239 410 107 291 139 128 230 167 147 159 159 172 116 110 260 177 0 177 169 168 186 165 366 195... (15 Replies)
Discussion started by: sdosanjh
15 Replies

9. Shell Programming and Scripting

awk - Adding and Subtracting Numbers from 2 Columns

Hi Folks, I have a file with 2 columns TAB delimited and I want to add '1' to the first column and subtract '-1' from the second column. What I have tried so far is; awk -F"\t" '{ $1-=1;$2+=1}1' OFS='\t' file File 0623 0623 0624 0624 0643 0643 1059 1037 1037 1037 1038 1038... (2 Replies)
Discussion started by: pshields1984
2 Replies

10. UNIX for Beginners Questions & Answers

Add values to file in 2 new columns

Columns 4 and 5 are X and Y coordinates, column 6 is the elevation I would like to add 2 new columns at the end of the file with values the distance between first(X)(Y) and last location (X)(Y), based in 2 rows the difference in elevation = ($6-prev6) How to calculate the requested values... (6 Replies)
Discussion started by: jiam912
6 Replies

LEARN ABOUT DEBIAN

colorgccrc

COLORGCCRC(5)							File Formats Manual						     COLORGCCRC(5)

NAME

       colorgccrc - configuration file for colorgcc

DESCRIPTION

       A colorgccrc configuration file is used to configure the highlighting of the compiler output from colorgcc.

SYNTAX

       Each  line  consists  of  a  keyword  designating  a configuration variable.  The keyword is followed by `:' and then one or several values
       (depending on the keyword).  Lines beginning with a hash mark `#' are comments.

CONFIGURATION VARIABLES

       g++ | gcc | c++ | cc | g77 | gcj | gnat | gpc
	      Specifies the paths to the compilers.  Takes one value; a path to the compiler.

       nocolor
	      Specifies what terminal types colorization should be disabled on.  Takes one or several values, separated by whitespace.

       srcColor
	      Specifies the highlighting attributes source-code should be given.  Takes one or several color attributes.  See  the  section  COLOR
	      ATTRIBUTES for more information.

       introColor
	      Specifies  the  highlighting  attributes	for normal compiler output.  Takes one or several color attributes.  See the section COLOR
	      ATTRIBUTES for more information.

       warningFileNameColor | errorFileNameColor
	      Specifies the highlighting attributes for the filename in a  warning  or	an  error,  respectively.   Takes  one	or  several  color
	      attributes.  See the section COLOR ATTRIBUTES for more information.

       warningNumberColor | errorNumberColor
	      Specifies  the  highlighting  attributes	for  the  line-number  in a warning or an error, respectively.	Takes one or several color
	      attributes.  See the section COLOR ATTRIBUTES for more information.

       warningMessageColor | errorMessageColor
	      Specifies the highlighting attributes for the message-text in a warning or an error,  respectively.   Takes  one	or  several  color
	      attributes.  See the section COLOR ATTRIBUTES for more information.

COLOR ATTRIBUTES

       The following attributes are valid for highlighting.

       clear, reset

       bold, underline, underscore, blink, reverse, concealed

       black, red, green, yellow, blue, magenta, cyan, white

       on_black, on_red, on_green, on_yellow, on_blue, on_magenta, on_cyan, on_white

SEE ALSO

       gcc(1), colorgcc(1)

HISTORY

       Jan 15 2003: Initial version of this manual-page.

REPORTING BUGS

       Report bugs to <jmoyers@geeks.com>

AUTHORS

       Jamie Moyers <jmoyers@geeks.com> is the author of colorgcc.

       This  manual  page  was	written  by Joe Wreschnig <piman@sacredchao.net>, and modified by David Weinehall <tao@debian.org>, for the Debian
       GNU/Linux system (but may be used by others).

COPYRIGHT

       Copyright (C) 2003 Jamie Moyers
       This is free software; see the source for copying conditions.  There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICU-
       LAR PURPOSE.

								   Jan 15, 2003 						     COLORGCCRC(5)
All times are GMT -4. The time now is 10:17 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy