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Top Forums Shell Programming and Scripting For loop to run external program Post 302557598 by oldmanwinter on Wednesday 21st of September 2011 04:41:56 PM
Old 09-21-2011
Thank you, except now it says "line 5: vina: command not found" if I change the code to
Code:
#!/bin/bash
FILES=/home/afalk/Desktop/battest/*.pdbqt
for f in $FILES 
do
$vina --config /home/afalk/Desktop/A.txt --ligand "$f".pdbqt
done

it returns "line 5: --config: command not found" config is an internal command for vina.
 

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IO::Async::Loop::Glib(3pm)				User Contributed Perl Documentation				IO::Async::Loop::Glib(3pm)

NAME
"IO::Async::Loop::Glib" - use "IO::Async" with Glib or GTK SYNOPSIS
use IO::Async::Loop::Glib; my $loop = IO::Async::Loop::Glib->new(); $loop->add( ... ); ... # Rest of GLib/Gtk program that uses GLib Glib::MainLoop->new->run(); Or $loop->loop_forever(); Or while(1) { $loop->loop_once(); } DESCRIPTION
This subclass of "IO::Async::Loop" uses the "Glib::MainLoop" to perform read-ready and write-ready tests. The appropriate "Glib::IO" sources are added or removed from the "Glib::MainLoop" when notifiers are added or removed from the set, or when they change their "want_writeready" status. The callbacks are called automatically by Glib itself; no special methods on this loop object are required. CONSTRUCTOR
$loop = IO::Async::Loop::Glib->new() This function returns a new instance of a "IO::Async::Loop::Glib" object. It takes no special arguments. METHODS
There are no special methods in this subclass, other than those provided by the "IO::Async::Loop" base class. $count = $loop->loop_once( $timeout ) This method calls the "iteration()" method on the underlying "Glib::MainContext". If a timeout value is supplied, then a Glib timeout will be installed, to interrupt the loop at that time. If Glib indicates that any callbacks were fired, then this method will return 1 (however, it does not mean that any "IO::Async" callbacks were invoked, as there may be other parts of code sharing the Glib main context. Otherwise, it will return 0. SEE ALSO
o Glib - Perl wrappers for the GLib utility and Object libraries o Gtk2 - Perl interface to the 2.x series of the Gimp Toolkit library AUTHOR
Paul Evans <leonerd@leonerd.org.uk> perl v5.14.2 2013-03-01 IO::Async::Loop::Glib(3pm)
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