Sponsored Content
Top Forums Shell Programming and Scripting Awk Search text string in field, not all in field. Post 302554179 by rocket_dog on Saturday 10th of September 2011 02:46:52 PM
Old 09-10-2011
Awk Search text string in field, not all in field.

Hello, I am using awk to match text in a tab separated field and am able to do so when matching the exact word. My problem is that I would like to match any sequence of text in the tab-separated field without having to match it all. Any help will be appreciated. Please see the code below.

Code:
awk -F'[\t]' 'NR==FNR{a[$0]; next} $6 in a{print > "/path/output_file"}' /path/list_of_text_to_match /path/list_of_text_to_search_from

Thanks in advance!
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

awk, comma as field separator and text inside double quotes as a field.

Hi, all I need to get fields in a line that are separated by commas, some of the fields are enclosed with double quotes, and they are supposed to be treated as a single field even if there are commas inside the quotes. sample input: for this line, 5 fields are supposed to be extracted, they... (8 Replies)
Discussion started by: kevintse
8 Replies

2. Shell Programming and Scripting

AWK: Pattern match between 2 files, then compare a field in file1 as > or < field in file2

First, thanks for the help in previous posts... couldn't have gotten where I am now without it! So here is what I have, I use AWK to match $1 and $2 as 1 string in file1 to $1 and $2 as 1 string in file2. Now I'm wondering if I can extend this AWK command to incorporate the following: If $1... (4 Replies)
Discussion started by: right_coaster
4 Replies

3. Shell Programming and Scripting

Search a string,get line and replace with second field

Hi, I need to search for source path in file2 , as per file1 and if found get the next line and take the field value and put it in URL value of file1. In file1, NF is not same for all the lines. file1: <type source="/home/USER/Desktop" Dest="/home/USER/DIR1/Desktop" URL="ssh/path"/> <type... (8 Replies)
Discussion started by: greet_sed
8 Replies

4. Shell Programming and Scripting

Search field in text file and replace value

Hi there, First of all this is my first post here. Thank you in advance for your help. What I am trying to do is the following. I have a text file where each field of each row is separated by a tabulator. Looks like this: ATOM 1 N HSE A 26 3.033 -10.429 -2.262 1.00 17.07 ... (8 Replies)
Discussion started by: doom4
8 Replies

5. Linux

How do I format a Date field of a .CSV file with multiple commas in a string field?

I have a .CSV file (file.csv) whose data are all enclosed in double quotes. Sample format of the file is as below: column1,column2,column3,column4,column5,column6, column7, Column8, Column9, Column10 "12","B000QRIGJ4","4432","string with quotes, and with a comma, and colon: in... (3 Replies)
Discussion started by: dhruuv369
3 Replies

6. Shell Programming and Scripting

awk repeat one field at all lines and modify field repetitions

Hello experts I have a file with paragraphs begining with a keeping date and ending with "END": 20120301 num num John num num A keepnum1 num num kathrin num num A keepnum1 num num kathrin num num B keepnum2 num num Pete num num A keepnum1 num num Jacob num... (2 Replies)
Discussion started by: phaethon
2 Replies

7. Shell Programming and Scripting

awk to parse field and include the text of 1 pipe in field 4

I am trying to parse the input in awk to include the |gc= in $4 but am not able to. The below is close: awk so far: awk '{sub(/\|]+]++/, ""); print }' input.txt Input chr1 955543 955763 AGRN-6|pr=2|gc=75 0 + chr1 957571 957852 AGRN-7|pr=3|gc=61.2 0 + chr1 970621 ... (7 Replies)
Discussion started by: cmccabe
7 Replies

8. Shell Programming and Scripting

awk to adjust coordinates in field based on sequential numbers in another field

I am trying to output a tab-delimited result that uses the data from a tab-delimited file to combine and subtract specific lines. If $4 matches in each line then the first matching sequential $6 value is added to $2, unless the value is 1, then the original $2 is used (like in the case of line... (3 Replies)
Discussion started by: cmccabe
3 Replies

9. Shell Programming and Scripting

awk to update field using matching value in file1 and substring in field in file2

In the awk below I am trying to set/update the value of $14 in file2 in bold, using the matching NM_ in $12 or $9 in file2 with the NM_ in $2 of file1. The lengths of $9 and $12 can be variable but what is consistent is the start pattern will always be NM_ and the end pattern is always ;... (2 Replies)
Discussion started by: cmccabe
2 Replies

10. UNIX for Beginners Questions & Answers

Problem with getting awk to multiply a field by a value set based on condition of another field

Hi, So awk is driving me crazy on this one. I have searched everywhere and read man, docs and every related post Google can find and still no luck. The actual files I need to run this on are sensitive in nature, but it is the same thing as if I needed to calculate weighted grades for multiple... (15 Replies)
Discussion started by: cotilloe
15 Replies
JOIN(1) 						    BSD General Commands Manual 						   JOIN(1)

NAME
join -- relational database operator SYNOPSIS
join [-a file_number | -v file_number] [-e string] [-o list] [-t char] [-1 field] [-2 field] file1 file2 DESCRIPTION
The join utility performs an ``equality join'' on the specified files and writes the result to the standard output. The ``join field'' is the field in each file by which the files are compared. The first field in each line is used by default. There is one line in the output for each pair of lines in file1 and file2 which have identical join fields. Each output line consists of the join field, the remaining fields from file1 and then the remaining fields from file2. The default field separators are tab and space characters. In this case, multiple tabs and spaces count as a single field separator, and leading tabs and spaces are ignored. The default output field separator is a single space character. Many of the options use file and field numbers. Both file numbers and field numbers are 1 based, i.e., the first file on the command line is file number 1 and the first field is field number 1. The following options are available: -a file_number In addition to the default output, produce a line for each unpairable line in file file_number. -e string Replace empty output fields with string. -o list The -o option specifies the fields that will be output from each file for each line with matching join fields. Each element of list has the either the form 'file_number.field', where file_number is a file number and field is a field number, or the form '0' (zero), representing the join field. The elements of list must be either comma (',') or whitespace separated. (The latter requires quoting to protect it from the shell, or, a simpler approach is to use multiple -o options.) -t char Use character char as a field delimiter for both input and output. Every occurrence of char in a line is significant. -v file_number Do not display the default output, but display a line for each unpairable line in file file_number. The options -v 1 and -v 2 may be specified at the same time. -1 field Join on the field'th field of file 1. -2 field Join on the field'th field of file 2. When the default field delimiter characters are used, the files to be joined should be ordered in the collating sequence of sort(1), using the -b option, on the fields on which they are to be joined, otherwise join may not report all field matches. When the field delimiter char- acters are specified by the -t option, the collating sequence should be the same as sort(1) without the -b option. If one of the arguments file1 or file2 is ``-'', the standard input is used. EXIT STATUS
The join utility exits 0 on success, and >0 if an error occurs. COMPATIBILITY
For compatibility with historic versions of join, the following options are available: -a In addition to the default output, produce a line for each unpairable line in both file 1 and file 2. -j1 field Join on the field'th field of file 1. -j2 field Join on the field'th field of file 2. -j field Join on the field'th field of both file 1 and file 2. -o list ... Historical implementations of join permitted multiple arguments to the -o option. These arguments were of the form 'file_number.field_number' as described for the current -o option. This has obvious difficulties in the presence of files named '1.2'. These options are available only so historic shell scripts do not require modification. They should not be used in new code. LEGACY DESCRIPTION
The -e option causes a specified string to be substituted into empty fields, even if they are in the middle of a line. In legacy mode, the substitution only takes place at the end of a line. Only documented options are allowed. In legacy mode, some obsolete options are re-written into current options. For more information about legacy mode, see compat(5). SEE ALSO
awk(1), comm(1), paste(1), sort(1), uniq(1), compat(5) STANDARDS
The join command conforms to IEEE Std 1003.1-2001 (``POSIX.1''). BSD
July 5, 2004 BSD
All times are GMT -4. The time now is 04:19 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy