Sponsored Content
Top Forums Shell Programming and Scripting Help with reformat input data Post 302552661 by getmmg on Monday 5th of September 2011 05:21:56 AM
Old 09-05-2011
If you want a perl solution Smilie
Code:
 
perl -0ane 'print "$1 $2\n" while /(.*)\n(.*)\n/g' input

 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

help reformat data with awk

I am trying to write an awk program to reformat a data table and convert the date to julian time. I have all the individual steps working, but I am having some issues joing them into one program. Can anyone help me out? Here is my code so far: # This is an awk program to convert the dates from... (4 Replies)
Discussion started by: climbak
4 Replies

2. Shell Programming and Scripting

Reformat Data (Perl)

I am new to Perl. I need to reformat a data file as the last part of a script I am working on. I am stuck on this. Here is the current format: CUSTOMER Filename 09/04/07-08:49 CUSTOMER Filename 09/04/07-08:52 CUSTOMER Filename 09/04/07-08:52 CUSTOMER2 Filename 09/04/07-08:49 CUSTOMER2... (3 Replies)
Discussion started by: flood
3 Replies

3. Shell Programming and Scripting

reformat data with a shell script

Can anyone help me with a shell script that can do the following: I have a data in fasta format (first line is the header, followed by a sequence of characters). >ALLLY GGCCCCTCGAGCCTCGAACCGGAACCTCCAAATCCGAGACGCTCTGCTTATGAGGACCTC GAAATATGCCGGCCAGTGAAAAAATCTTGTGGCTTTGAGGGCTTTTGGTTGGCCAGGGGC... (5 Replies)
Discussion started by: manishabh
5 Replies

4. Shell Programming and Scripting

Reformat the data of a file.

I have a file which have data like A.txt a 1Jan I am in a1. 1Jan I was born. 2Jan I am here. 3Jan I am in a3. b 1Jan I am in b1. c 2Jan I am in c2. d 2Jan I am in d2. 5jan I am in d5. date in the file might be vary evertime. (9 Replies)
Discussion started by: samkhu
9 Replies

5. Shell Programming and Scripting

Help with reformat data content

input file: hsa-miR-4726-5p Score hsa-miR-483-5p Score hsa-miR-125b-2* Score hsa-miR-4492 hsa-miR-4508 hsa-miR-4486 Score Desired output file: hsa-miR-4726-5p Score hsa-miR-483-5p Score hsa-miR-125b-2* Score hsa-miR-4492 hsa-miR-4508 hsa-miR-4486 Score ... (6 Replies)
Discussion started by: perl_beginner
6 Replies

6. Shell Programming and Scripting

Reformat MLS Data - Use AWK?

I am helping my wife set up a real estate site and I am starting to integrate MLS listings. We are using a HostGator level 5 VPS running CentOS and have full root and SSH access to the VPS. Thus far I have automated the daily FTP download of listings from our MLS server using a little sh script.... (4 Replies)
Discussion started by: Chicago_Realtor
4 Replies

7. Shell Programming and Scripting

Data reformat and rearrangement problem asking

Input file: dependent general_process dependent general_process regulation general_process - - template component food component binding data_rearrangement binding data_rearrangement specific_activity data_rearrangement - ... (7 Replies)
Discussion started by: cpp_beginner
7 Replies

8. Shell Programming and Scripting

Help with reformat data structure

Input file: bv|111259484|pir||T49736_real_data bv|159484|pir||T9736_data_figure bv|113584|prf|T4736|truth bv|113584|pir||T4736_truth Desired output: bv|111259484|pir|T49736|real_data bv|159484|pir|T9736|data_figure bv|113584|prf|T4736|truth bv|113584|pir|T4736|truth Once the... (8 Replies)
Discussion started by: perl_beginner
8 Replies

9. Shell Programming and Scripting

Help with reformat data set

Input file 4CL1 O24145 CoA1 4CL1 P31684 CoA1 4CL1 Q54P77 CoA_1 73 O36421 Unknown 4CL3 Q9S777 coumarate 4CL3 Q54P79 coumarate 4CL3 QP7932 coumarate Desired output result 4CL1 O24145#P31684 CoA1 4CL1 Q54P77 CoA_1 73 O36421 Unknown 4CL3 Q9S777#Q54P79#QP7932 coumarate I... (5 Replies)
Discussion started by: perl_beginner
5 Replies

10. Shell Programming and Scripting

awk to reformat output if input file is empty, but not if file has data in it

The below awk improved bu @MadeInGermany, works great as long as the input file has data in it in the below format: input chrX 25031028 25031925 chrX:25031028-25031925 ARX 631 18 chrX 25031028 25031925 chrX:25031028-25031925 ARX 632 14... (3 Replies)
Discussion started by: cmccabe
3 Replies
IO::Async::Protocol::LineStream(3pm)			User Contributed Perl Documentation		      IO::Async::Protocol::LineStream(3pm)

NAME
"IO::Async::Protocol::LineStream" - stream-based protocols using lines of text SYNOPSIS
Most likely this class will be subclassed to implement a particular network protocol. package Net::Async::HelloWorld; use strict; use warnings; use base qw( IO::Async::Protocol::LineStream ); sub on_read_line { my $self = shift; my ( $line ) = @_; if( $line =~ m/^HELLO (.*)/ ) { my $name = $1; $self->invoke_event( on_hello => $name ); } } sub send_hello { my $self = shift; my ( $name ) = @_; $self->write_line( "HELLO $name" ); } This small example elides such details as error handling, which a real protocol implementation would be likely to contain. DESCRIPTION
EVENTS
The following events are invoked, either using subclass methods or CODE references in parameters: on_read_line $line Invoked when a new complete line of input is received. PARAMETERS
The following named parameters may be passed to "new" or "configure": on_read_line => CODE CODE reference for the "on_read_line" event. METHODS
$lineprotocol->write_line( $text ) Writes a line of text to the transport stream. The text will have the end-of-line marker appended to it; $text should not end with it. AUTHOR
Paul Evans <leonerd@leonerd.org.uk> perl v5.14.2 2012-10-24 IO::Async::Protocol::LineStream(3pm)
All times are GMT -4. The time now is 12:44 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy