Sponsored Content
Full Discussion: awk split
Top Forums UNIX for Dummies Questions & Answers awk split Post 302546942 by dude2cool on Friday 12th of August 2011 02:36:10 PM
Old 08-12-2011
Try this one liner awk, see if it helps:

Code:
echo "m110730_101608_00120_c100168052554400000315046108261127_s1_p0/7/29_426ACGTGCTATGCGG"|awk -F'A' '{print $1 " " "A" $2 $3}'

---------- Post updated at 02:36 PM ---------- Previous update was at 02:34 PM ----------

off course if you want to print just ACGT...

Code:
echo "m110730_101608_00120_c100168052554400000315046108261127_s1_p0/7/29_426ACGTGCTATGCGG"|awk -F'A' '{print  "A" $2 $3}'


Last edited by zxmaus; 08-12-2011 at 11:45 PM..
This User Gave Thanks to dude2cool For This Post:
 

10 More Discussions You Might Find Interesting

1. UNIX for Dummies Questions & Answers

Split a file with no pattern -- Split, Csplit, Awk

I have gone through all the threads in the forum and tested out different things. I am trying to split a 3GB file into multiple files. Some files are even larger than this. For example: split -l 3000000 filename.txt This is very slow and it splits the file with 3 million records in each... (10 Replies)
Discussion started by: madhunk
10 Replies

2. Shell Programming and Scripting

awk - split function

Hi, I have some output in the form of: #output: abc123 def567 hij890 ghi324 the above is in one column, stored in the variable x ( and if you wana know about x... x=sprintf(tolower(substr(someArray,1,1)substr(userArray,3,1)substr(userArray,2,1))) when i simply print x (print x) I get... (7 Replies)
Discussion started by: fusionX
7 Replies

3. Shell Programming and Scripting

split file with awk

I did a lot of search on this forum on spiting file; found a lot, but my requirement is a bit different, please guide. Master file: x:start:5 line1:23 line2:12 2:90 x:end:5 x:start:2 45:56 22:90 x:end:2 x:start:3 line1:23 line2:12 x:end:3 x:start:2 line5:23 (1 Reply)
Discussion started by: uwork72
1 Replies

4. Shell Programming and Scripting

awk to split string

Hello Friends, Im trying to split a string. When i use first method of awk like below i have an error: method1 (I specified the FS as ":" so is this wrong?) servert1{root}>awk -f split.txt awk: syntax error near line 2 awk: bailing out near line 2 split.txt:... (5 Replies)
Discussion started by: EAGL€
5 Replies

5. Shell Programming and Scripting

AWK split

Dear colleagues! I want to create a script which will take each file from the list and then parse it filename with awk/split. I do it this way: for file in `cat /$FileListFN`; do echo `awk ' {N=split(FILENAME,FNParts,"_")} {for (i=1; i<=N; i++) ... (10 Replies)
Discussion started by: slarionoff
10 Replies

6. UNIX for Dummies Questions & Answers

awk split

Can anybody tell me what is wrong with this ? It does not produce anyoutput. awk 'split( "this:that", arr,":")' (2 Replies)
Discussion started by: jville
2 Replies

7. Shell Programming and Scripting

awk to split one field and print the last two fields within the split part.

Hello; I have a file consists of 4 columns separated by tab. The problem is the third fields. Some of the them are very long but can be split by the vertical bar "|". Also some of them do not contain the string "UniProt", but I could ignore it at this moment, and sort the file afterwards. Here is... (5 Replies)
Discussion started by: yifangt
5 Replies

8. Shell Programming and Scripting

awk split numbers

I would like to split a string of numbers "1-2,4-13,16,19-20,21-25,31-32" and output these with awk into -dFirstPage=1 -dLastPage=2 file.pdf -dFirstPage=4 -dLastPage=13 file.pdf -dFirstPage=16 -dLastPage=16 file.pdf file.pdf -dFirstPage=19 -dLastPage=20 file.pdf -dFirstPage=21 -dLastPage=25... (3 Replies)
Discussion started by: sdf
3 Replies

9. Shell Programming and Scripting

awk split help

Hello, I have the following input file: A=1;B=2;C=3;D=4 A=4;B=6;C=7;D=9 I wish to have the following output 1 2 3 4 4 6 7 9 Can awk split be used to do this? I have done this without using split, but the process is quite tedious. Any help is appreciated! (4 Replies)
Discussion started by: Rabu
4 Replies

10. Shell Programming and Scripting

awk split and awk calculation in the same command

I am trying to run the awk below. My question is when I split the input, then run anotherawk to perform a calculation using that splitas the input there are no issues. When I try to combine them the output is not correct, is the split not working or did I do it wrong? Thank you :). input ... (8 Replies)
Discussion started by: cmccabe
8 Replies
Locale::Codes::LangExt(3pm)				 Perl Programmers Reference Guide			       Locale::Codes::LangExt(3pm)

NAME
Locale::Codes::LangExt - standard codes for language extension identification SYNOPSIS
use Locale::Codes::LangExt; $lext = code2langext('acm'); # $lext gets 'Mesopotamian Arabic' $code = langext2code('Mesopotamian Arabic'); # $code gets 'acm' @codes = all_langext_codes(); @names = all_langext_names(); DESCRIPTION
The "Locale::Codes::LangExt" module provides access to standard codes used for identifying language extensions, such as those as defined in the IANA language registry. Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default IANA language registry codes will be used. SUPPORTED CODE SETS
There are several different code sets you can use for identifying language extensions. A code set may be specified using either a name, or a constant that is automatically exported by this module. For example, the two are equivalent: $lext = code2langext('acm','alpha'); $lext = code2langext('acm',LOCALE_LANGEXT_ALPHA); The codesets currently supported are: alpha This is the set of three-letter (lowercase) codes from the IANA language registry, such as 'acm' for Mesopotamian Arabic. This is the default code set. ROUTINES
code2langext ( CODE [,CODESET] ) langext2code ( NAME [,CODESET] ) langext_code2code ( CODE ,CODESET ,CODESET2 ) all_langext_codes ( [CODESET] ) all_langext_names ( [CODESET] ) Locale::Codes::LangExt::rename_langext ( CODE ,NEW_NAME [,CODESET] ) Locale::Codes::LangExt::add_langext ( CODE ,NAME [,CODESET] ) Locale::Codes::LangExt::delete_langext ( CODE [,CODESET] ) Locale::Codes::LangExt::add_langext_alias ( NAME ,NEW_NAME ) Locale::Codes::LangExt::delete_langext_alias ( NAME ) Locale::Codes::LangExt::rename_langext_code ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangExt::add_langext_code_alias ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangExt::delete_langext_code_alias ( CODE [,CODESET] ) These routines are all documented in the Locale::Codes::API man page. SEE ALSO
Locale::Codes The Locale-Codes distribution. Locale::Codes::API The list of functions supported by this module. http://www.iana.org/assignments/language-subtag-registry The IANA language subtag registry. AUTHOR
See Locale::Codes for full author history. Currently maintained by Sullivan Beck (sbeck@cpan.org). COPYRIGHT
Copyright (c) 2011-2012 Sullivan Beck This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself. perl v5.16.2 2012-10-11 Locale::Codes::LangExt(3pm)
All times are GMT -4. The time now is 11:36 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy