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Full Discussion: replace "," with "." only in specific columns of a file?
Top Forums UNIX for Dummies Questions & Answers replace "," with "." only in specific columns of a file? Post 302545434 by Unilearn on Monday 8th of August 2011 10:24:58 AM
Old 08-08-2011
Here you go,

File.txt

MarkerName Allele1 Allele2 Freq1 FreqSE Weight Zscore P-value Direct
1kg_2_25451489 c g 0.3220 0.0329 233.00 3.732 0.0001903+++-
imm_12_9663851 a g 0.1388 0.0111 209.00 3.724 0.0001958+++?
imm_12_9679839 a g 0.8612 0.0111 209.00 -3.724 0.0001958---?
imm_12_9698340 t c 0.8804 0.0107 233.00 -4.215 2.5e-005----
imm_12_9698384 a g 0.8804 0.0107 233.00 -4.215 2.5e-005----
imm_12_9698598 a g 0.8804 0.0107 233.00 -4.215 2.5e-005----
imm_12_9699693 t c 0.8804 0.0107 233.00 -4.215 2.5e-005----
imm_12_9699837 t c 0.8804 0.0107 233.00 -4.215 2.5e-005----

So when I sort them according to 8th coloumn, I would expect it to have

MarkerName Allele1 Allele2 Freq1 FreqSE Weight Zscore P-value Direct
imm_12_9698340 t c 0.8804 0.0107 233.00 -4.215 2.5e-005----
imm_12_9698384 a g 0.8804 0.0107 233.00 -4.215 2.5e-005----
imm_12_9698598 a g 0.8804 0.0107 233.00 -4.215 2.5e-005----
imm_12_9699693 t c 0.8804 0.0107 233.00 -4.215 2.5e-005----
imm_12_9699837 t c 0.8804 0.0107 233.00 -4.215 2.5e-005----
1kg_2_25451489 c g 0.3220 0.0329 233.00 3.732 0.0001903+++-
imm_12_9663851 a g 0.1388 0.0111 209.00 3.724 0.0001958+++?
imm_12_9679839 a g 0.8612 0.0111 209.00 -3.724 0.0001958---?

Thanks!
 

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LEARN ABOUT SUNOS

iconv_852

iconv_852(5)						Standards, Environments, and Macros					      iconv_852(5)

NAME

       iconv_852 - code set conversion tables for MS 852 (MS-DOS Latin 2)

DESCRIPTION

       The following code set conversions are supported:

       +--------------------------------------------------------------------+
       |		  Code Set Conversions Supported		    |
       +--------------+--------+--------------+--------+--------------------+
       |    Code      |Symbol  |Target Code   |Symbol  |   Target Output    |
       +--------------+--------+--------------+--------+--------------------+
       |MS 852	      |dos2    |ISO 8859-2    |iso2    | ISO Latin 2	    |
       +--------------+--------+--------------+--------+--------------------+
       |MS 852	      |dos2    |MS 1250       |win2    | Windows Latin 2    |
       +--------------+--------+--------------+--------+--------------------+
       |MS 852	      |dos2    |Mazovia       |maz     | Mazovia	    |
       +--------------+--------+--------------+--------+--------------------+
       |MS 852	      |dos2    |DHN	      |dhn     | Dom Handlowy Nauki |
       +--------------+--------+--------------+--------+--------------------+

CONVERSIONS

       The conversions are performed according to the following tables. All values in the tables are given in octal.

   MS 852 to ISO 8859-2
       For the conversion of MS 852 to ISO 8859-2, all characters not in the following table are mapped unchanged.

       +-----------------------------------------------------------------+
       |	       |     Conversions|Performed	 |		 |
       |    MS 852     |  ISO 8859-2	|    MS 852	 |  ISO 8859-2	 |
       |24-177	       | 40		|271-274	 |40		 |
       |200	       | 307		|275		 |257		 |
       |201	       | 374		|276		 |277		 |
       |202	       | 351		|277-305	 |40		 |
       |203	       | 342		|306		 |303		 |
       |204	       | 344		|307		 |343		 |
       |205	       | 371		|310-316	 |40		 |
       |206	       | 346		|317		 |244		 |
       |207	       | 347		|320		 |360		 |
       |210	       | 263		|321		 |320		 |
       |211	       | 353		|322		 |317		 |
       |212	       | 325		|323		 |313		 |
       |213	       | 365		|324		 |357		 |
       |214	       | 356		|325		 |322		 |
       |215	       | 254		|326		 |315		 |
       |216	       | 304		|327		 |316		 |
       |217	       | 306		|330		 |354		 |
       |220	       | 311		|331-334	 |40		 |
       |221	       | 305		|335		 |336		 |
       |222	       | 345		|336		 |331		 |
       |223	       | 364		|337		 |40		 |
       |224	       | 366		|340		 |323		 |
       |225	       | 245		|341		 |337		 |
       |226	       | 265		|342		 |324		 |
       |227	       | 246		|343		 |321		 |
       |230	       | 266		|344		 |361		 |
       |231	       | 326		|345		 |362		 |
       |232	       | 334		|346		 |251		 |
       |233	       | 253		|347		 |271		 |
       |234	       | 273		|350		 |300		 |
       |235	       | 243		|351		 |332		 |
       |236	       | 327		|352		 |340		 |
       |237	       | 350		|353		 |333		 |
       |240	       | 341		|354		 |375		 |
       |241	       | 355		|355		 |335		 |
       |242	       | 363		|356		 |376		 |
       |243	       | 372		|357		 |264		 |
       |244	       | 241		|360		 |255		 |
       |245	       | 261		|361		 |275		 |
       |246	       | 256		|362		 |262		 |
       |247	       | 276		|363		 |267		 |
       |250	       | 312		|364		 |242		 |
       |251	       | 352		|365		 |247		 |
       |252	       | 40		|366		 |367		 |
       |253	       | 274		|367		 |270		 |
       |254	       | 310		|370		 |260		 |
       |255	       | 272		|371		 |250		 |
       |256-264        | 40		|372		 |377		 |
       |265	       | 301		|374		 |330		 |
       |266	       | 302		|375		 |370		 |
       |267	       | 314		|376		 |40		 |
       |270	       | 252		|		 |		 |
       +---------------+----------------+----------------+---------------+

   MS 852 to MS 1250
       For the conversion of MS 852 to MS 1250, all characters not in the following table are mapped unchanged.

       +-----------------------------------------------------------------+
       |	       |     Conversions|Performed	 |		 |
       |    MS 852     |    MS 1250	|    MS 852	 |   MS 1250	 |
       |200	       | 307		|270		 |252		 |
       |201	       | 374		|271-274	 |40		 |
       |202	       | 351		|275		 |257		 |
       |203	       | 342		|276		 |277		 |
       |204	       | 344		|277-305	 |40		 |
       |205	       | 371		|306		 |303		 |
       |206	       | 346		|307		 |343		 |
       |207	       | 347		|310-316	 |40		 |
       |210	       | 263		|317		 |244		 |
       |211	       | 353		|320		 |360		 |
       |212	       | 325		|321		 |320		 |
       |213	       | 365		|322		 |317		 |
       |214	       | 356		|323		 |313		 |
       |215	       | 217		|324		 |357		 |
       |216	       | 304		|325		 |322		 |
       |217	       | 306		|326		 |315		 |
       |220	       | 311		|327		 |316		 |
       |221	       | 305		|330		 |354		 |
       |222	       | 345		|331-334	 |40		 |
       |223	       | 364		|335		 |336		 |
       |224	       | 366		|336		 |331		 |
       |225	       | 274		|337		 |40		 |
       |226	       | 276		|340		 |323		 |
       |227	       | 214		|341		 |337		 |
       |230	       | 234		|342		 |324		 |
       |231	       | 326		|343		 |321		 |
       |232	       | 334		|344		 |361		 |
       |233	       | 215		|345		 |362		 |
       |234	       | 235		|346		 |212		 |
       |235	       | 243		|347		 |232		 |
       |236	       | 327		|350		 |300		 |
       |237	       | 350		|351		 |332		 |
       |240	       | 341		|352		 |340		 |
       |241	       | 355		|353		 |333		 |
       |242	       | 363		|354		 |375		 |
       |243	       | 372		|355		 |335		 |
       |244	       | 245		|356		 |376		 |
       |245	       | 271		|357		 |264		 |
       |246	       | 216		|360		 |255		 |
       |247	       | 236		|361		 |275		 |
       |250	       | 312		|362		 |262		 |
       |251	       | 352		|363		 |241		 |
       |252	       | 254		|364		 |242		 |
       |253	       | 237		|365		 |247		 |
       |254	       | 310		|366		 |367		 |
       |255	       | 272		|367		 |270		 |
       |256	       | 253		|370		 |260		 |
       |257	       | 273		|371		 |250		 |
       |260-264        | 40		|372		 |377		 |
       |265	       | 301		|374		 |330		 |
       |266	       | 302		|375		 |370		 |
       |267	       | 314		|376		 |40		 |
       +---------------+----------------+----------------+---------------+

   MS 852 to Mazovia
       For the conversion of MS 852 to Mazovia, all characters not in the following table are mapped unchanged.

       +-----------------------------------------------------------------+
       |	       |     Conversions|Performed	 |		 |
       |    MS 852     |    Mazovia	|    MS 852	 |   Mazovia	 |
       |205	       | 40		|246-247	 |40		 |
       |206	       | 215		|250		 |220		 |
       |210	       | 222		|251		 |221		 |
       |212-213        | 40		|253		 |246		 |
       |215	       | 240		|254-270	 |40		 |
       |217	       | 225		|275		 |241		 |
       |220-226        | 40		|276		 |247		 |
       |227	       | 230		|306-336	 |40		 |
       |230	       | 236		|340		 |243		 |
       |233-234        | 40		|342		 |40		 |
       |235	       | 234		|343		 |245		 |
       |236-243        | 40		|344		 |244		 |
       |244	       | 217		|345-375	 |40		 |
       |245	       | 206		|		 |		 |
       +---------------+----------------+----------------+---------------+

   MS 852 to DHN
       For the conversion of MS 852 to DHN, all characters not in the following table are mapped unchanged.

       +-----------------------------------------------------------------+
       |	       |     Conversions|Performed	 |		 |
       |    MS 852     |      DHN	|    MS 852	 |     DHN	 |
       |200-205        | 40		|244		 |200		 |
       |206	       | 212		|245		 |211		 |
       |207	       | 40		|246-247	 |40		 |
       |210	       | 214		|250		 |202		 |
       |211-214        | 40		|251		 |213		 |
       |215	       | 207		|253		 |220		 |
       |216	       | 40		|254-270	 |40		 |
       |217	       | 201		|275		 |210		 |
       |220-226        | 40		|276		 |221		 |
       |227	       | 206		|306-336	 |40		 |
       |230	       | 217		|340		 |205		 |
       |233-234        | 40		|342		 |40		 |
       |235	       | 203		|343		 |204		 |
       |236-237        | 40		|344		 |215		 |
       |242	       | 216		|345-375	 |40		 |
       |252	       | 254		|		 |		 |
       +---------------+----------------+----------------+---------------+

FILES

       /usr/lib/iconv/*.so	       conversion modules

       /usr/lib/iconv/*.t	       conversion tables

       /usr/lib/iconv/iconv_data       list of conversions supported by conversion tables

SEE ALSO

       iconv(1), iconv(3C), iconv(5)

SunOS 5.10							    18 Apr 1997 						      iconv_852(5)
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