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Top Forums UNIX for Advanced & Expert Users In a huge file, Delete duplicate lines leaving unique lines Post 302543863 by krishnix on Tuesday 2nd of August 2011 10:06:54 AM
Old 08-02-2011
In a huge file, Delete duplicate lines leaving unique lines

Hi All,

I have a very huge file (4GB) which has duplicate lines. I want to delete duplicate lines leaving unique lines. Sort, uniq, awk '!x[$0]++' are not working as its running out of buffer space.

I dont know if this works : I want to read each line of the File in a For Loop, and want to delete all the matching lines leaving 1 line. This way I think it will not use any buffer space.
PS: Idea is not use any second file.
Suggestions please.

input data:
Code:
adsf123
asdlfkjlasdfj
adsf123
asdfasdf12341234
asdfasdf12341234
asdlfkjlasdfj343
asdlfkjlasdfj56

output data:
Code:
adsf123
asdlfkjlasdfj
asdfasdf12341234
asdlfkjlasdfj343
asdlfkjlasdfj56

Thanks,
Krish

Last edited by radoulov; 08-02-2011 at 11:07 AM.. Reason: Code tags!
 

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UNIQ(1) 						    BSD General Commands Manual 						   UNIQ(1)

NAME
uniq -- report or filter out repeated lines in a file SYNOPSIS
uniq [-c | -d | -u] [-i] [-f num] [-s chars] [input_file [output_file]] DESCRIPTION
The uniq utility reads the specified input_file comparing adjacent lines, and writes a copy of each unique input line to the output_file. If input_file is a single dash ('-') or absent, the standard input is read. If output_file is absent, standard output is used for output. The second and succeeding copies of identical adjacent input lines are not written. Repeated lines in the input will not be detected if they are not adjacent, so it may be necessary to sort the files first. The following options are available: -c Precede each output line with the count of the number of times the line occurred in the input, followed by a single space. -d Only output lines that are repeated in the input. -f num Ignore the first num fields in each input line when doing comparisons. A field is a string of non-blank characters separated from adjacent fields by blanks. Field numbers are one based, i.e., the first field is field one. -s chars Ignore the first chars characters in each input line when doing comparisons. If specified in conjunction with the -f option, the first chars characters after the first num fields will be ignored. Character numbers are one based, i.e., the first character is character one. -u Only output lines that are not repeated in the input. -i Case insensitive comparison of lines. ENVIRONMENT
The LANG, LC_ALL, LC_COLLATE and LC_CTYPE environment variables affect the execution of uniq as described in environ(7). EXIT STATUS
The uniq utility exits 0 on success, and >0 if an error occurs. COMPATIBILITY
The historic +number and -number options have been deprecated but are still supported in this implementation. SEE ALSO
sort(1) STANDARDS
The uniq utility conforms to IEEE Std 1003.1-2001 (``POSIX.1'') as amended by Cor. 1-2002. HISTORY
A uniq command appeared in Version 3 AT&T UNIX. BSD
December 17, 2009 BSD
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