print "Do you want to continue (y/n) ? " | tee -a /dev/tty
read answer
if [[ "$answer" = "y" || "$answer" = "Y" ]];
The above code is very unusual.
This would normal if you just want to read what someone typed in response to the question:
It would be helpful to see all the scripts.
If you are trying to read the value of $answer in the calling process, this is impossible. A variable created in a sub-script is not available to the calling script. There are techniques to get round this.
Anybody know what's wrong with this syntax?
awk -v job="$job" 'BEGIN { FS="|"}
{print $1,$2," ",$4," ",$3\n,$5,"\n"}' list
It's keeping give me this message:
awk: syntax error near line 1
awk: bailing out near line 1
It seems awk has problem with my BEGIN command.
Any... (8 Replies)
Does anybody know how to print a variable passed to awk command?
awk -F"|" 'BEGIN {print $job,"\n","Question \n"} {print $1,$2$4," ",$3}' "job=$job1" file1
I am trying to pass job the variable job1.
the output is blank.
?? (3 Replies)
Hi All,
I pass a Perl script variable, whch is passed to a query to be prepared. But the problem is I have special character like '&' in this variable which are handled in a special way by the Oracle query parser. How do I get over this?
my $cust_name='A&B';
my $sql="Select cust_short_name... (1 Reply)
Hi
I have written a script using ftp to get files from one server and copy them to 2 dirrerent servers. I wish to call this script from a parent script that will check the number of files copied and run a check sum for each file. As the filenames for the files in the get portion of the script... (3 Replies)
Hi
I have two shell scripts A and B
A calls B
I would like to use a variable in A the value of which is assigned by
B after calling B
Thanks in advance
Suresh (8 Replies)
Hi,
Can you please help. I am scripting in sh and I am trying to simply copy one directory to another but for some reason my variables are not recognised?
echo "The latest version of the program is being found......."
cd $SOFTWARE/src/$progname
version=`ls $SOFTWARE/src/$progname | grep... (13 Replies)
I have a file in my unix directory called "restart_job1.job". Below is a sample of the script where I am doing a 'grep' to check specifically for an oracle error. If the value 'ORA-" is found, I set a variable to hold the return code value (job1_return_code). If the return code is non zero, I... (2 Replies)
I am having difficulties with the fllowing script:
!/bin/sh
voicemaildir=/var/spool/asterisk/voicemail/$1/$2/INBOX/
echo `date` ':' $voicemaildir >> /var/log/voicemail-notify.log
for audiofile in `ls $voicemaildir/*.wav`; do
transcriptfile=${audiofile/wav/transcript}
... (4 Replies)
I have a script.
#!/bin/sh
cur_$1_modify_time=Hello
echo "cur_$1_modify_time"
When I run like
sh /root/script1 jj
I expect value "Hello" being assigned to variable "cur_jj_modify_time" and output being "Hello" ie echoing $cur_jj_modify_time
But the output comes as
# sh... (3 Replies)
In the bash below the variable date displays in the echo. However when I use it in the for loop it does not. Basically, the user inputs a date then that date is converted to the desired format of (month-day-year, no leading 0). That input is used in the for loop to return every file that matches... (5 Replies)
Discussion started by: cmccabe
5 Replies
LEARN ABOUT DEBIAN
bio::installer::clustalw
Bio::Installer::Clustalw(3pm) User Contributed Perl Documentation Bio::Installer::Clustalw(3pm)NAME
Bio::Installer::Clustalw - DESCRIPTION of Object
SYNOPSIS
Give standard usage here
DESCRIPTION
Describe the object here
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
http://redmine.open-bio.org/projects/bioperl/
AUTHOR - Albert Vilella
Email avilella-AT-gmail-DOT-com
Describe contact details here
CONTRIBUTORS
Additional contributors names and emails here
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
get_default
Title : get_default
Usage :
Function:
Example :
Returns :
Args :
install
Title : install
Usage : $installer->install();
Function:
Example :
Returns :
Args :
_execute_make
Title : _execute_make
Usage :
Function:
Example :
Returns :
Args :
perl v5.12.3 2011-06-18 Bio::Installer::Clustalw(3pm)