I had the "Symbol referencing errors" while compiling a C socket code.
It said "Undefined Symbol: socketpair", but I already copy the two head files (#include "types.h", #include "socket.h") into my current directory.
Could anyone help me with it? Thanks.
By the way, I'm using Solaris, OS version is 5.10.
GCC version is 3.4.6.(is it because the GCC version is old?)
The tut2.c code I was using is from the following link: A Socket-based IPC Tutorial
I'm trying to compile a FTP_API program. To do this you must use the libftp.so libary. But that libary has references which are not defined. Has anyone had this problems and how is it corrected??
The command line looks like this:--------------------------------------------
# cc ftpstock.c -lftp... (5 Replies)
Hello!
I have some problems installing a program called “Jail Chroot Project”.
http://www.gsyc.inf.uc3m.es/~assman/jail/index.html
I have only installed precompiled programs before and I get some kind of error message when im trying to compile this program.
I have downloaded and... (2 Replies)
Hi all,
I am getting the following error when I try to do a build of a product.
I dont have the dependencies of the binaries involved in the build and thats the reason I was not able to find which library to add or to proceed to the next step to solve the reference problem.
Undefined ... (1 Reply)
I am getting below error, any ideas to resolve it.
1:ts_n_tcp_cmp_row /finder3/baseline/95s/ed/src/lib/libfinder_ui_basic.so
1:ui_convert_date /finder3/baseline/95s/ed/src/lib/libfinder_fi_basic.so
1:ld: fatal: Symbol referencing errors. No output written... (1 Reply)
Hi,
This is odd, however here goes. There are several shell scripts that run in our production environment AIX 595 LPAR m/c, which has sufficient memory 14GB (physical memory) and horsepower 5CPUs. However from time to time we get the following errors in these shell scripts. The time when these... (11 Replies)
Hi,
I'm trying to compile OpenTTD on Solaris 5.10. I do not have root permissions so I have to set the prefix-dir to /home/abcde/usr/local/opt/opentdd-0.6.3
I've used the following command to configure:
bash ./configure --prefix-dir=/opt/openttd-0.6.2 --without-makedepend \... (1 Reply)
Hello. I used to compile my code including a third-party library, "libfoo.so". Now, the vendor ships a statically linked library, "libfoo.a", instead. With this library, I run into the following error:
CC -mt -xarch=v9 -DCOMPILE_SOL_SPARC -ftrap=%none -xlibmil -xchip=ultra2 -xbuiltin -xO4 \... (0 Replies)
Hi,
I have line in input file as below:
3G_CENTRAL;INDONESIA_(M)_TELKOMSEL;SPECIAL_WORLD_GRP_7_FA_2_TELKOMSEL
My expected output for line in the file must be :
"1-Radon1-cMOC_deg"|"LDIndex"|"3G_CENTRAL|INDONESIA_(M)_TELKOMSEL"|LAST|"SPECIAL_WORLD_GRP_7_FA_2_TELKOMSEL"
Can someone... (7 Replies)
Undefined first referenced
symbol in file
logf /var/tmp//ccwztFsO.o
ld: fatal: Symbol referencing errors. No output written to a.out
collect2: ld returned 1 exit status
float exponC(float mean)
{
index1++;... (1 Reply)
Experts ,
In the given output of the log file, the 2nd field that is separated by "|" pipe is not aligned well due to the uneven data length, I would like it to align the 2nd column with 37 length (that is disturbed in the output) including the pipe . The two pepe "|" would be in a aligned way... (2 Replies)
Discussion started by: rveri
2 Replies
LEARN ABOUT DEBIAN
bio::symbol::symbol
Bio::Symbol::Symbol(3pm) User Contributed Perl Documentation Bio::Symbol::Symbol(3pm)NAME
Bio::Symbol::Symbol - A biological symbol
SYNOPSIS
use Bio::Symbol::Symbol;
my $thymine = Bio::Symbol::Symbol->new(-name => 'Thy',
-token=> 'T');
my $a = Bio::Symbol::Symbol->new(-token => 'A' );
my $u = Bio::Symbol::Symbol->new(-token => 'U' );
my $g = Bio::Symbol::Symbol->new(-token => 'G' );
my $M = Bio::Symbol::Symbol->new(-name => 'Met',
-token => 'M',
-symbols => [ $a, $u, $g ]);
my ($name,$token) = ($a->name, $a->token);
my @symbols = $a->symbols;
my $matches = $a->matches;
DESCRIPTION
Symbol represents a single token in the sequence. Symbol can have multiple synonyms or matches within the same Alphabet, which makes
possible to represent ambiguity codes and gaps.
Symbols can be also composed from ordered list other symbols. For example, codons can be represented by single Symbol using a compound
Alphabet made from three DNA Alphabets.
This module was implemented for the purposes of meeting the BSANE/BioCORBA spec 0.3 only.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Jason Stajich
Email jason@bioperl.org
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
new
Title : new
Usage : my $obj = Bio::Symbol::Symbol->new();
Function: Builds a new Bio::Symbol::Symbol object
Returns : Bio::Symbol::Symbol
Args : -name => descriptive name (string) [e.g. Met]
-token => Shorthand token (string) [e.g. M]
-symbols => Symbols that make up this symbol (array) [e.g. AUG]
-matches => Alphabet in the event symbol is an ambiguity
code.
name
Title : name
Usage : my $name = $symbol->name();
Function: Get/Set Descriptive name for Symbol
Returns : string
Args : (optional) string
token
Title : token
Usage : my $token = $self->token();
Function: Get/Set token for this symbol
Example : Letter A,C,G,or T for a DNA alphabet Symbol
Returns : string
Args : (optional) string
symbols
Title : symbols
Usage : my @symbols = $self->symbols();
Function: Get/Set Symbols this Symbol is composed from
Example : Ambiguity symbols are made up > 1 base symbol
Returns : Array of Bio::Symbol::SymbolI objects
Args : (optional) Array of Bio::Symbol::SymbolI objects
matches
Title : matches
Usage : my $matchalphabet = $symbol->matches();
Function: Get/Set (Sub) alphabet of symbols matched by this symbol
including the symbol itself (i.e. if symbol is DNA
ambiguity code W then the matches contains symbols for W
and T)
Returns : Bio::Symbol::AlphabetI
Args : (optional) Bio::Symbol::AlphabetI
equals
Title : equals
Usage : if( $symbol->equals($symbol2) ) { }
Function: Tests if a symbol is equal to another
Returns : Boolean
Args : Bio::Symbol::SymbolI
perl v5.14.2 2012-03-02 Bio::Symbol::Symbol(3pm)