I have files with an x amounts of rows with each row having 2 columns seperated by delimiter "|" .
File contains following records for example.
15|69
15|70
15|71
15|72
15|73
15|74
16|2
16|3
16|4
16|5
16|6
16|7
16|8
16|9
16|10
16|11
16|12 (4 Replies)
Hi everyone,
I once again got stuck with merging tables and was wondering if someone could help me out on that problem.
I have a number of tab delimited tables which I need to merge into one big one. All tables have the same header but a different number of rows (this could be changed if... (6 Replies)
Hi all,
I have a complex (beyond my biological expertise) problem at hand.
I need to merge multiple files into 1 big matrix. Please help me with some code.
Inp1
Ang_0 chr1 98 T A
Ang_0 chr1 352 G A
Ang_0 chr1 425 C T
Ang_0 chr2 ... (1 Reply)
Hi,
I have a file (sorted by sort) with 8 tab delimited columns. The first column contains duplicated fields and I need to merge all these identical lines.
My input file:
comp100002 aaa bbb ccc ddd eee fff ggg
comp100003 aba aba aba aba aba aba aba
comp100003 fff fff fff fff fff fff fff... (5 Replies)
Hi all,
In a directory of many files, I need to merge only files which do not have identical lines and also the resulatant merge file should not be more than 50000 lines. Basically I need to cover up all text files in that directory and turn them to Merge files.txt with 50000 lines each
... (2 Replies)
Hi all,
I need some help to remove duplicates from a file before merging.
I have got 2 files:
file1 has data in format
4300 23456
4301 2357
the 4 byte values on the right hand side is uniq, and are not repeated anywhere in the file
file 2 has data in same format but is not in... (10 Replies)
Hi,
Please excuse me , i have searched unix forum, i am unable to find what i expect ,
my query is , i have 2 files of same structure and having 1 similar field/column , i need to merge 2 tables/files based on the one matched field/column (that is field 1),
file 1:... (5 Replies)
please help solving the following. I have access to redhat linux cluster having 32gigs of ram.
I have duplicate ids for variable names, in the file 1,2 are duplicates;3,4 and 5 are duplicates;6 and 7 are duplicates. My objective is to use only the first occurrence of these duplicates.
Lookup... (4 Replies)
Discussion started by: ritakadm
4 Replies
LEARN ABOUT DEBIAN
h5diff
h5diff(1) General Commands Manual h5diff(1)NAME
h5diff - Compares two HDF5 files and reports the differences.
SYNOPSIS
h5diff file1 file2 [OPTIONS] [object1 [object2 ] ]
DESCRIPTION
h5diff is a command line tool that compares two HDF5 files, file1 and file2, and reports the differences between them.
Optionally, h5diff will compare two objects within these files. If only one object, object1, is specified, h5diff will compare object1 in
file1 with object1 in file2. In two objects, object1 and object2, are specified, h5diff will compare object1 in file1 with object2 in
file2. These objects must be HDF5 datasets.
object1 and object2 must be expressed as absolute paths from the respective file's root group.
Additional information, with several sample cases, can be found in the document H5diff Examples.
OPTIONS
file1 file2
The HDF5 files to be compared.
-h Print all differences.
-r Print only the names of objects that differ; do not print the differences. These objects may be HDF5 datasets, groups, or named
datatypes.
-n count
Print difference up to count differences, then stop. count must be a positive integer.
-d delta
Print only differences that are greater than the limit delta. delta must be a positive number. The comparison criterion is whether
the absolute value of the difference of two corresponding values is greater than delta (e.g., |a-b| > delta, where a is a value in
file1 and b is a value in file2).
-p relative
Print only differences that are greater than a relative error. relative must be a positive number. The comparison criterion is
whether the absolute value of the difference 1 and the ratio of two corresponding values is greater than relative (e.g., |1-(b/a)| >
relative where a is a value in file1 and b is a value in file2).
object1 object2
Specific object(s) within the files to be compared.
EXAMPLES
The following h5diff call compares the object /a/b in file1 with the object /a/c in file2:
h5diff file1 file2 /a/b /a/c
This h5diff call compares the object /a/b in file1 with the same object in file2:
h5diff file1 file2 /a/b
And this h5diff call compares all objects in both files:
h5diff file1 file2
SEE ALSO h5dump(1), h5ls(1), h5repart(1), h5import(1), gif2h5(1), h52gif(1), h5perf(1)h5diff(1)