sort each column of text file alone Post: 302521395

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Sort a particular column in a file

Dear All, Good day. Here i am facing some problem like below. file contains 12345 0001 090112 14385 0001 090112 13255 0001 090112 11345 0001 090112 .... I want to sort ascending according to the first column. What will be the shell script.

2. Shell Programming and Scripting

Search max value in a column in a file instead of sort

Hi Everyone, 1.txt 00:00:00 0 0 0 0 0 0 0 00:00:01 0 0 0 2 1 33 2 00:00:02 5 0 0 0 0 0 0 00:00:03 0 4 0 0 0 0 0...

3. Shell Programming and Scripting

Sort file based on column

Hi, My input file is $cat samp 1 siva 1 raja 2 siva 1 siva 2 raja 4 venkat i want sort this name wise...alos need to remove duplicate lines. i am using cat samp|awk '{print $2,$1}'|sort -u it showing raja 1

4. UNIX for Dummies Questions & Answers

How to insert alternative columns and sort text from first column to second?

Hi Everybody, I am just new to UNIX as well as to this forum. I have a text file with 10,000 coloumns and each coloumn contains values separated by space. I want to separate them into new coloumns..the file is something like this as ad af 1 A as ad af 1 D ... ... 1 and A are in one...

5. Shell Programming and Scripting

Can't sort file by size column

Hello, I've done ls -ls >fileout1 When I do the sort command for +4 it sorts it bu group. When I do +5 it sorts it by date. But it's skipping the file size column. Example: rwxr-xr-x 1 Grueben sup 65 16 Sep 13:58 cdee How can I sort it by file size? It doesn't...

6. UNIX for Dummies Questions & Answers

Sort text file starting at column X

Hello everyone! As the heading reads, I would like to sort the lines of a text file, starting at a specific column (i.e. skip the first X characters of each line). What I’m actually trying to sort is the md5 sums file of a directory. Every time I copy a new file to that directory, I perform...

7. UNIX for Dummies Questions & Answers

sort a unix file by 3rd column

Hi, Can anybody tell me how to sort a unix file by 3rd column and not by ltr? Please help Thanks in advance

8. Shell Programming and Scripting

Sort a file content using one column

Hello All, I have a file which have content as below. 03/09/2014 10:35 AM 618 Admin\rick pqr_ klm2_pog12_20140309_c.xlsx 03/10/2014 10:35 AM 618 user\test01 mplz_ fgh2_lal12_20140310_c.xlsx 03/17/2014 10:35 AM 618 Admin\vick abc_ xyz2_bc12_20140317_c.xlsx 03/18/2014 ...

9. UNIX for Beginners Questions & Answers

How to sort a column in excel/csv file?

I have to sort the 4th column of an excel/csv file. I tried the following command sort -u --field-separator=, --numeric-sort -k 2 -n dinesh.csv > test.csv But, it's not working. Moreover, I have to do the same for more than 30 excel/csv file. So please help me to do the same.

10. UNIX for Beginners Questions & Answers

How to align/sort the column pairs of an csv file, based on keyword word specified in another file?

I have a csv file as shown below, xop_thy 80 avr_njk 50 str_nyu 60 avr_irt 70 str_nhj 60 avr_ngt 50 str_tgt 80 xop_nmg 50 xop_nth 40 cyv_gty 40 cop_thl 40 vir_tyk 80 vir_plo 20 vir_thk 40 ijk_yuc 70 cop_thy 70 ijk_yuc 80 irt_hgt 80 I need to align/sort the csv file based...

LEARN ABOUT DEBIAN

fastx_quality_stats

FASTX_QUALITY_STATS(1)						   User Commands					    FASTX_QUALITY_STATS(1)

NAME

       fastx_quality_stats - FASTX Statistics

DESCRIPTION

       usage: fastx_quality_stats [-h] [-N] [-i INFILE] [-o OUTFILE] Part of FASTX Toolkit 0.0.13.2 by A. Gordon (gordon@cshl.edu)

	      [-h]  =  This  helpful help screen.  [-i INFILE]	= FASTQ input file. default is STDIN.  [-o OUTFILE] = TEXT output file. default is
	      STDOUT.  [-N]	    = New output format (with more information per nucleotide/cycle).

   The *OLD* output TEXT file will have the following fields (one row per column):
       column = column number (1 to 36 for a 36-cycles read solexa file)

       count  = number of bases found in this column.

       min    = Lowest quality score value found in this column.

       max    = Highest quality score value found in this column.

       sum    = Sum of quality score values for this column.

       mean   = Mean quality score value for this column.

       Q1     = 1st quartile quality score.

       med    = Median quality score.

       Q3     = 3rd quartile quality score.

       IQR    = Inter-Quartile range (Q3-Q1).

       lW     = 'Left-Whisker' value (for boxplotting).

       rW     = 'Right-Whisker' value (for boxplotting).

	      A_Count = Count of 'A' nucleotides found in this column.	C_Count = Count of 'C' nucleotides found in this column.  G_Count =  Count
	      of  'G'  nucleotides found in this column.  T_Count = Count of 'T' nucleotides found in this column.  N_Count = Count of 'N' nucleo-
	      tides found in this column.  max-count = max. number of bases (in all cycles)

   The *NEW* output format:
	      cycle (previously called 'column') = cycle number max-count For each nucleotide in the cycle (ALL/A/C/G/T/N):

       count  = number of bases found in this column.

       min    = Lowest quality score value found in this column.

       max    = Highest quality score value found in this column.

       sum    = Sum of quality score values for this column.

       mean   = Mean quality score value for this column.

       Q1     = 1st quartile quality score.

       med    = Median quality score.

       Q3     = 3rd quartile quality score.

       IQR    = Inter-Quartile range (Q3-Q1).

       lW     = 'Left-Whisker' value (for boxplotting).

       rW     = 'Right-Whisker' value (for boxplotting).

SEE ALSO

       The quality of this automatically generated manpage might be insufficient.  It is suggested to visit

	      http://hannonlab.cshl.edu/fastx_toolkit/commandline.html

       to get a better layout as well as an overview about connected FASTX tools.

fastx_quality_stats 0.0.13.2					     May 2012						    FASTX_QUALITY_STATS(1)