Sponsored Content
Full Discussion: Remove duplicate lines
Top Forums Shell Programming and Scripting Remove duplicate lines Post 302518452 by zhshqzyc on Friday 29th of April 2011 04:39:39 PM
Old 04-29-2011
Remove duplicate lines

Hi, I have a huge file which is about 50GB. There are many lines. The file format likes
Code:
21 rs885550 0 9887804 C C T C C C C C C C
21 rs210498 0 9928860 0 0 C C 0 0 0 0 0 0
21 rs303304 0 9941889 A A A A A A A A A A 
22 rs303304 0 9941890 0 A A A A A A A A A

The question is that there are a few duplicate rows. The definition of the duplicate is meant the second column is repeated. It doesn't mean the entire line are exactly same, just the the second column.
In the above example, line 3 and 4 can be defined as duplicate. The have the same string
Code:
rs303304

We can remove either of them.
The delimeter could be a white space or tab.
After remove the duplicate lines the result will be saved in a new file.

Thanks.
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Remove Duplicate Lines in File

I am doing KSH script to remove duplicate lines in a file. Let say the file has format below. FileA 1253-6856 3101-4011 1827-1356 1822-1157 1822-1157 1000-1410 1000-1410 1822-1231 1822-1231 3101-4011 1822-1157 1822-1231 and I want to simply it with no duplicate line as file... (5 Replies)
Discussion started by: Teh Tiack Ein
5 Replies

2. Shell Programming and Scripting

how to remove duplicate lines

I have following file content (3 fields each line): 23 888 10.0.0.1 dfh 787 10.0.0.2 dssf dgfas 10.0.0.3 dsgas dg 10.0.0.4 df dasa 10.0.0.5 df dag 10.0.0.5 dfd dfdas 10.0.0.5 dfd dfd 10.0.0.6 daf nfd 10.0.0.6 ... as can be seen, that the third field is ip address and sorted. but... (3 Replies)
Discussion started by: fredao
3 Replies

3. UNIX for Dummies Questions & Answers

Remove Duplicate lines from File

I have a log file "logreport" that contains several lines as seen below: 04:20:00 /usr/lib/snmp/snmpdx: Agent snmpd appeared dead but responded to ping 06:38:08 /usr/lib/snmp/snmpdx: Agent snmpd appeared dead but responded to ping 07:11:05 /usr/lib/snmp/snmpdx: Agent snmpd appeared dead but... (18 Replies)
Discussion started by: Nysif Steve
18 Replies

4. Shell Programming and Scripting

remove duplicate lines using awk

Hi, I came to know that using awk '!x++' removes the duplicate lines. Can anyone please explain the above syntax. I want to understand how the above awk syntax removes the duplicates. Thanks in advance, sudvishw :confused: (7 Replies)
Discussion started by: sudvishw
7 Replies

5. Shell Programming and Scripting

Need to remove the duplicate lines from a log!!

Hello Folks, Can some one help me with the removal of duplicate lines from a log file and send it to another log file. It's bit complicated as two lines are same but only difference is the timestamp, but some lines are uniq. Line has been seperated by colon's. Log file:... (5 Replies)
Discussion started by: sim_je
5 Replies

6. Shell Programming and Scripting

remove duplicate lines with condition

hi to all Does anyone know if there's a way to remove duplicate lines which we consider the same only if they have the first and the second column the same? For example I have : us2333 bbb 5 us2333 bbb 3 us2333 bbb 2 and I want to get us2333 bbb 10 The thing is I cannot... (2 Replies)
Discussion started by: vlm
2 Replies

7. UNIX for Dummies Questions & Answers

Remove Duplicate Lines

Hi I need this output. Thanks. Input: TAZ YET FOO FOO VAK TAZ BAR Output: YET VAK BAR (10 Replies)
Discussion started by: tara123
10 Replies

8. Shell Programming and Scripting

Remove duplicate lines from a file

Hi, I have a csv file which contains some millions of lines in it. The first line(Header) repeats at every 50000th line. I want to remove all the duplicate headers from the second occurance(should not remove the first line). I don't want to use any pattern from the Header as I have some... (7 Replies)
Discussion started by: sudhakar T
7 Replies

9. Shell Programming and Scripting

Remove lines containing 2 or more duplicate strings

Within my text file i have several thousand lines of text with some lines containing duplicate strings/words. I would like to entirely remove those lines which contain the duplicate strings. Eg; One and a Two Unix.com is the Best This as a Line Line Example duplicate sentence with the word... (22 Replies)
Discussion started by: martinsmith
22 Replies

10. Shell Programming and Scripting

How to remove duplicate lines?

Hi All, I am storing the result in the variable result_text using the below code. result_text=$(printf "$result_text\t\n$name") The result_text is having the below text. Which is having duplicate lines. file and time for the interval 03:30 - 03:45 file and time for the interval 03:30 - 03:45 ... (4 Replies)
Discussion started by: nalu
4 Replies
UNIQ(1) 								FSF								   UNIQ(1)

NAME
uniq - remove duplicate lines from a sorted file SYNOPSIS
uniq [OPTION]... [INPUT [OUTPUT]] DESCRIPTION
Discard all but one of successive identical lines from INPUT (or standard input), writing to OUTPUT (or standard output). Mandatory arguments to long options are mandatory for short options too. -c, --count prefix lines by the number of occurrences -d, --repeated only print duplicate lines -D, --all-repeated[=delimit-method] print all duplicate lines delimit-method={none(default),prepend,separate} Delimiting is done with blank lines. -f, --skip-fields=N avoid comparing the first N fields -i, --ignore-case ignore differences in case when comparing -s, --skip-chars=N avoid comparing the first N characters -u, --unique only print unique lines -w, --check-chars=N compare no more than N characters in lines --help display this help and exit --version output version information and exit A field is a run of whitespace, then non-whitespace characters. Fields are skipped before chars. AUTHOR
Written by Richard Stallman and David MacKenzie. REPORTING BUGS
Report bugs to <bug-coreutils@gnu.org>. COPYRIGHT
Copyright (C) 2002 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICU- LAR PURPOSE. SEE ALSO
The full documentation for uniq is maintained as a Texinfo manual. If the info and uniq programs are properly installed at your site, the command info uniq should give you access to the complete manual. uniq (coreutils) 4.5.3 February 2003 UNIQ(1)
All times are GMT -4. The time now is 07:41 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy