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Full Discussion: Manipulating files
Top Forums UNIX for Dummies Questions & Answers Manipulating files Post 302503364 by pawannoel on Thursday 10th of March 2011 10:07:31 AM
Old 03-10-2011
MySQL Manipulating files

Hi Guys,
I'm really new to Unix and Linux and other scripting languages but recently I hv been really enthusiatic about learning more to help out on my work.
So I have a file with 3 columns. A sample of it looks like looks like this :
K2_537841 AAATCAGCCGCAACATTTGC AACCACCTGCCTTTGTTTCC
K2_793131 AGAAGGTCGGGGACTTCTTC CCTGAGTGAGCGCATATTGC
K4_631836 GGACAATACACGCCAATCTG TTGATTCTTCCTGGCGGTAG
K7_478339 GCGGCCAACAATGTAACCTT GGTGGCCTGGCATAATAGGA
K8_337205 CTGCAGACCTGGAGTTCCAA GGACCCATTTATGGGTTTCC
K10_583020 AATGCCATTGACCGTTTGAG TAACTACTGACGCAGCAGAC
K12_175548 CTTCTCCGCAATGGAGAGAG GTATGGCACTTCGACTTTCG
K13_93992 GCAAGTCAGGGTTCTCATCG AAGTGGATCCTTCCGGTTCC
K15_400245 GTTAATGCCCGACACCCTAG AGCCAGAAAATGACGCACTG
K15_691640 GAAGACGACCGTTCGTCTTC TTGTGCGCCTGTTTCTGATG


Now what I need doing is using command line/script I want to duplicate each entry in the first column and place it in the line below. Then I need to rename the first one usinf _Fw and the second one as _Rev. Its gets more complicated. Then each entry in column 2 to be placed in front of the _Fw named fields and each entry in column 3 to be placed in front the _Rev named fields.

Can someone please help or suggest ways. Again I'm a newbie so even basic comments will be very much appreciated.

Thanks and hope to hear from you all.

Have a nice day Smilie

Pawan
 

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Mail::SpamAssassin::Plugin::AutoLearnThreshold(3)	User Contributed Perl Documentation	 Mail::SpamAssassin::Plugin::AutoLearnThreshold(3)

NAME
Mail::SpamAssassin::Plugin::AutoLearnThreshold - threshold-based discriminator for Bayes auto-learning SYNOPSIS
loadplugin Mail::SpamAssassin::Plugin::AutoLearnThreshold DESCRIPTION
This plugin implements the threshold-based auto-learning discriminator for SpamAssassin's Bayes subsystem. Auto-learning is a mechanism whereby high-scoring mails (or low-scoring mails, for non-spam) are fed into its learning systems without user intervention, during scanning. Note that certain tests are ignored when determining whether a message should be trained upon: o rules with tflags set to 'learn' (the Bayesian rules) o rules with tflags set to 'userconf' (user configuration) o rules with tflags set to 'noautolearn' Also note that auto-learning occurs using scores from either scoreset 0 or 1, depending on what scoreset is used during message check. It is likely that the message check and auto-learn scores will be different. USER OPTIONS
The following configuration settings are used to control auto-learning: bayes_auto_learn_threshold_nonspam n.nn (default: 0.1) The score threshold below which a mail has to score, to be fed into SpamAssassin's learning systems automatically as a non-spam message. bayes_auto_learn_threshold_spam n.nn (default: 12.0) The score threshold above which a mail has to score, to be fed into SpamAssassin's learning systems automatically as a spam message. Note: SpamAssassin requires at least 3 points from the header, and 3 points from the body to auto-learn as spam. Therefore, the minimum working value for this option is 6. perl v5.12.1 2010-03-16 Mail::SpamAssassin::Plugin::AutoLearnThreshold(3)
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