02-17-2011
I tried this command below since the record is 4000 byte and has 290 ; as delimiters. i need to filter out bad records where the delimiter counts do not match.
awk -F \; '{print>(NF==291?"goodfile1":"rejectedfile1")}' infile
and got this error
awk: syntax error near line 1
awk: bailing out near line 1
I also tried this
awk -F";" 'NF==291{print >"goodfile" ;next}{print >"rejected"}' infile
and get different error
awk: record `00000036200800;20080...' too long
it seems like awk has limitation on the record length :-( google directed me to simple change to the command. and nawk worked well. Thank you everyone!
nawk -F";" 'NF==291{print >"goodfile" ;next}{print >"rejected"}' infile
Last edited by lv99; 02-17-2011 at 01:26 PM..
9 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Input file data contents:
>seq_1
MSNQSPPQSQRPGHSHSHSHSHAGLASSTSSHSNPSANASYNLNGPRTGGDQRYRASVDA
>seq_2
AGAAGRGWGRDVTAAASPNPRNGGGRPASDLLSVGNAGGQASFASPETIDRWFEDLQHYE
>seq_3
ATLEEMAAASLDANFKEELSAIEQWFRVLSEAERTAALYSLLQSSTQVQMRFFVTVLQQM
ARADPITALLSPANPGQASMEAQMDAKLAAMGLKSPASPAVRQYARQSLSGDTYLSPHSA... (7 Replies)
Discussion started by: patrick87
7 Replies
2. Shell Programming and Scripting
Below is my perl script:
#!/usr/bin/perl
open(FILE,"$ARGV") or die "$!";
@DATA = <FILE>;
close FILE;
$join = join("",@DATA);
@array = split( ">",$join);
for($i=0;$i<=scalar(@array);$i++){
system ("/home/bin/./program_name_count_length MULTI_sequence_DATA_FILE -d... (5 Replies)
Discussion started by: patrick87
5 Replies
3. Shell Programming and Scripting
I have a directory of files that I need to rename by splitting the first and second halves of the filenames using the delimiter "-O" and then renaming with the second half first, followed by two underscores and then the first half. For example, natfinal1995annvol1_14.pdf -O filenum-20639 will be... (2 Replies)
Discussion started by: swimulator
2 Replies
4. Shell Programming and Scripting
I have file which contains around 5000 lines.
The lines are fixed legth but having no delimiter.Each line line contains nearly 3000 characters.
I want to delete the lines
a> if it starts with 1 and if 576th postion is a digit i,e 0-9
or
b> if it starts with 0 or 9(i,e header and footer)
... (4 Replies)
Discussion started by: millan
4 Replies
5. Shell Programming and Scripting
Hi,
I have a file which has many URLs delimited by space. Now i want them to move to separate files each one holding 10 URLs per file.
http://3276.e-printphoto.co.uk/guardian http://abdera.apache.org/ http://abdera.apache.org/docs/api/index.html
I have used the below code to arrange... (6 Replies)
Discussion started by: vel4ever
6 Replies
6. UNIX for Dummies Questions & Answers
Hi,
I have a Huge 7 GB file which has around 1 million records, i want to split this file into 4 files to contain around 250k messages each.
Please help me as Split command cannot work here as it might miss tags..
Format of the file is as below
<!--###### ###### START-->... (6 Replies)
Discussion started by: KishM
6 Replies
7. Shell Programming and Scripting
We have a folder XYZ with large number of files (>350,000). how can i split the folder and create say 10 of them XYZ1 to XYZ10 with 35,000 files each. (doesnt matter which files go where). (12 Replies)
Discussion started by: AlokKumbhare
12 Replies
8. UNIX for Advanced & Expert Users
I have 2 large file (.dat) around 70 g, 12 columns but the data not sorted in both the files.. need your inputs in giving the best optimized method/command to achieve this and redirect the not macthing lines to the thrid file ( diff.dat)
File 1 - 15 columns
File 2 - 15 columns
Data is... (9 Replies)
Discussion started by: kartikirans
9 Replies
9. UNIX for Beginners Questions & Answers
I have a large semicolon delimited file with thousands of columns and many thousands of line. It looks like:
ID1;ID2;ID3;ID4;A_1;B_1;C_1;A_2;B_2;C_2;A_3;B_3;C_3
AA;ax;ay;az;01;02;03;04;05;06;07;08;09
BB;bx;by;bz;03;05;33;44;15;26;27;08;09
I want to split this table in to multiple files:
... (1 Reply)
Discussion started by: trymega
1 Replies
LEARN ABOUT REDHAT
set_color
set_color(1) fish set_color(1)
NAME
set_color - set_color - set the terminal color
set_color - set the terminal color
Synopsis
set_color [-v --version] [-h --help] [-b --background COLOR] [COLOR]
Description
Change the foreground and/or background color of the terminal. COLOR is one of black, red, green, brown, yellow, blue, magenta, purple,
cyan, white and normal.
o -b, --background Set the background color
o -c, --print-colors Prints a list of all valid color names
o -h, --help Display help message and exit
o -o, --bold Set bold or extra bright mode
o -u, --underline Set underlined mode
o -v, --version Display version and exit
Calling set_color normal will set the terminal color to whatever is the default color of the terminal.
Some terminals use the --bold escape sequence to switch to a brighter color set. On such terminals, set_color white will result in a grey
font color, while set_color --bold white will result in a white font color.
Not all terminal emulators support all these features. This is not a bug in set_color but a missing feature in the terminal emulator.
set_color uses the terminfo database to look up how to change terminal colors on whatever terminal is in use. Some systems have old and
incomplete terminfo databases, and may lack color information for terminals that support it. Download and install the latest version of
ncurses and recompile fish against it in order to fix this issue.
Version 1.23.1 Sun Jan 8 2012 set_color(1)