Going through book, "Guide to UNIX Using Linux". I am doing one of the projects that has me writing scripts to join files. Here is my pnumname script and I am extracting the programmers names and numbers from the program file and redirecting the output to the file pnn. I then created a joinall script where I am trying to join the files pnn and pnumname and redirect the output to pactrep ( join -t: a1 -j1 1 -j2 1 pnn pnum > pactrep)When I run the script sh joinall and use less to display the contents of the redirected file pactrep, I get an error- join: extra operand `pnum'
Try `join --help' for more information.... I went to the man pages but I still (obvious) do not have a solid grasp. Thanks for the help in advance.
output file pnn results...
joinall script ---------- Post updated at 10:21 AM ---------- Previous update was at 09:19 AM ----------
forget it, I figured it out, I am so stupid. minus a1 -a1
Last edited by radoulov; 02-11-2011 at 01:18 PM..
Reason: use code tags please
Hi everybody,
I am hoping somebody here will be either be able to solve my troubles or at least give me a push in the right direction :) .
I am developing a shell script to read in 4 different files worth of data that each contain a list of:
username firstname secondname group score
I... (2 Replies)
Hi guyz
Excuse me for posting simple question
I tried join and sort and other perl commands but failed
I have 2 files. 1st file contain single column with around 6000 values (rows).
Second file contain 2 columns 1st column is the same column (in 1st file) but randomly ordered and second... (5 Replies)
Hello,
My apologies if this has been posted elsewhere, I have had a look at several threads but I am still confused how to use these functions. I have two files, each with 5 columns:
File A: (tab-delimited)
PDB CHAIN Start End Fragment
1avq A 171 176 awyfan
1avq A 172 177 wyfany
1c7k A 2 7... (3 Replies)
Been tearing my hair out trying to work out how to make the -t option in the join command work.
Joining two files on col 1; columns in both files are separated by tabs.
file1:
2010/02/01-00:00 10.63
2010/02/01-00:06 10.63
2010/02/01-00:12 10.61
2010/02/01-00:18 10.58
(there are LOTS... (4 Replies)
1. The problem statement, all variables and given/known data:
I have two files created from extracting data off of two CSV files, one containing class enrollment on a specific quarter and the other containing grades for that specific quarter. The Enrollment file generated contains course name,... (11 Replies)
So I want to join two files that have a lot of rows
The file named gen1 has 2 columns:
head gen1
1008567 0.4026931012
1119535 0.7088912314
1120590 0.7093805634
1145994 0.7287952590
1148140 0.7313924434
1155173 0.7359550430
1188481 0.7598914553
1201155 0.7663406553
1206921... (2 Replies)
Dear all,
I have two files (each only contains 1 column) as attached. I want to combined the two files and only show the common records in both files. But when I use join command only the last row was combined. Anyone know what is the problem? I don't know how to write the correct code to only... (2 Replies)
I have a weird issue going on with the join command...
I have two files I am trying to join...here is a line from each file with the important parts marked in red:
file1:
/groupspace/ccops/cmis/bauwkrcn/commsamp_20140315.txt,1
file2:... (3 Replies)
I have 2 files. File 1 is a daily file with only a bunch of IDs and a date column. File 2 has all the dump of IDs and their respective cost. I basically want an inner join. When I am picking a few rows from these files and joining, they work perfectly fine. But when I join the full files together,... (13 Replies)
Discussion started by: Varshha
13 Replies
LEARN ABOUT NETBSD
join
JOIN(1) BSD General Commands Manual JOIN(1)NAME
join -- relational database operator
SYNOPSIS
join [-a file_number | -v file_number] [-e string] [-j file_number field] [-o list] [-t char] [-1 field] [-2 field] file1 file2
DESCRIPTION
The join utility performs an ``equality join'' on the specified files and writes the result to the standard output. The ``join field'' is
the field in each file by which the files are compared. The first field in each line is used by default. There is one line in the output
for each pair of lines in file1 and file2 which have identical join fields. Each output line consists of the join field, the remaining
fields from file1 and then the remaining fields from file2.
The default field separators are tab and space characters. In this case, multiple tabs and spaces count as a single field separator, and
leading tabs and spaces are ignored. The default output field separator is a single space character.
Many of the options use file and field numbers. Both file numbers and field numbers are 1 based, i.e. the first file on the command line is
file number 1 and the first field is field number 1. The following options are available:
-a file_number
In addition to the default output, produce a line for each unpairable line in file file_number. (The argument to -a must not be
preceded by a space; see the COMPATIBILITY section.)
-e string Replace empty output fields with string.
-o list The -o option specifies the fields that will be output from each file for each line with matching join fields. Each element of
list has the form 'file_number.field', where file_number is a file number and field is a field number. The elements of list must
be either comma (``,'') or whitespace separated. (The latter requires quoting to protect it from the shell, or, a simpler
approach is to use multiple -o options.)
-t char Use character char as a field delimiter for both input and output. Every occurrence of char in a line is significant.
-v file_number
Do not display the default output, but display a line for each unpairable line in file file_number. The options -v 1 and -v 2
may be specified at the same time.
-1 field Join on the field'th field of file 1.
-2 field Join on the field'th field of file 2.
When the default field delimiter characters are used, the files to be joined should be ordered in the collating sequence of sort(1), using
the -b option, on the fields on which they are to be joined, otherwise join may not report all field matches. When the field delimiter char-
acters are specified by the -t option, the collating sequence should be the same as sort(1) without the -b option.
If one of the arguments file1 or file2 is ``-'', the standard input is used.
The join utility exits 0 on success, and >0 if an error occurs.
COMPATIBILITY
For compatibility with historic versions of join, the following options are available:
-a In addition to the default output, produce a line for each unpairable line in both file 1 and file 2. (To distinguish between
this and -a file_number, join currently requires that the latter not include any white space.)
-j1 field Join on the field'th field of file 1.
-j2 field Join on the field'th field of file 2.
-j field Join on the field'th field of both file 1 and file 2.
-o list ...
Historical implementations of join permitted multiple arguments to the -o option. These arguments were of the form ``file_num-
ber.field_number'' as described for the current -o option. This has obvious difficulties in the presence of files named ``1.2''.
These options are available only so historic shell scripts don't require modification and should not be used.
SEE ALSO awk(1), comm(1), paste(1), sort(1), uniq(1)STANDARDS
The join command is expected to be IEEE Std 1003.2 (``POSIX.2'') compatible.
BSD April 28, 1995 BSD