The two files do not seem to match even partially!
The string "mira_assembly_rep_c" is present in line 1 of File 1, and it is present in at the beginning of all lines of File 2.
Other than there, there is nothing in common.
What's the logic for the merged file then?
Why is the 2nd line of merged file as follows?
And why is the 3rd line of the merged file like so ?
Maybe you could explain how you derived the merged file.
Hi All,
I have working (Perl) code to combine 2 input files into a single output file using the join function that works to a point, but has the following limitations:
1. I am restrained to 2 input files only.
2. Only the "matched" fields are written out to the "matched" output file and... (1 Reply)
I have n files (for ex:64 files) with one similar column. Is it possible to combine them all based on that column ?
file1
ax100 20 30 40
ax200 22 33 44
file2
ax100 10 20 40
ax200 12 13 44
file2
ax100 0 0 4
ax200 2 3 4 (9 Replies)
Hi,
I have line in input file as below:
3G_CENTRAL;INDONESIA_(M)_TELKOMSEL;SPECIAL_WORLD_GRP_7_FA_2_TELKOMSEL
My expected output for line in the file must be :
"1-Radon1-cMOC_deg"|"LDIndex"|"3G_CENTRAL|INDONESIA_(M)_TELKOMSEL"|LAST|"SPECIAL_WORLD_GRP_7_FA_2_TELKOMSEL"
Can someone... (7 Replies)
Hi,
I'm dealing with an issue and losing a lot of hours figuring out how i would solve this.
I have an input file which looks like this:
('BLABLA +200-GRS','Serviço ','TarifaçãoServiço','wap.bla.us.0000000121',2985,0,55,' de conversão em escada','Dia','Domingos')
('BLABLA +200-GRR','Serviço... (6 Replies)
Hi,
I have 20 tab delimited text files that have a common column (column 1). The files are named GSM1.txt through GSM20.txt. Each file has 3 columns (2 other columns in addition to the first common column).
I want to write a script to join the files by the first common column so that in the... (5 Replies)
Hi all,
I'm trying to join two .txt file tab delimitated based on a common column.
File 1
transcript_id gene_id length effective_length expected_count TPM FPKM IsoPct
comp1000201_c0_seq1 comp1000201_c0 337 183.51 0.00 0.00 0.00 0.00
comp1000297_c0_seq1 ... (1 Reply)
Dear Ladies & Gents,
I have a requirement to delete all the log files in /var/log/test directory that are older than 10 days and their first line begin with "MSH" or "<?xml" or "FHS". I've put together the following BASH script, but it's erroring out:
for filename in $(find /var/log/test... (2 Replies)
Hello,
This post is already here but want to do this with another way
Merge multiples files with multiples duplicates keys by filling "NULL" the void columns for anothers joinning files
file1.csv:
1|abc
1|def
2|ghi
2|jkl
3|mno
3|pqr
file2.csv:
1|123|jojo
1|NULL|bibi... (2 Replies)
Discussion started by: yjacknewton
2 Replies
LEARN ABOUT DEBIAN
tau_merge
TAU_MERGE(1) Tools TAU_MERGE(1)NAME
tau_merge - combine multiple node and or thread TAU tracefiles into a merged tracefile
SYNOPSIS
tau_merge [-a] [-r] [-n] [-e eventfile_list] [-m output_eventfile] {tracefile_list} [{output_tracefile} { - }]
DESCRIPTION
tau_merge is generated when TAU is configured with the -TRACE option.
This tool assembles a set of tau trace and event files from multiple multiple nodes or threads across a program's execution into a single
unified trace file. Many TAU trace file tools operate on merged trace files.
Minimally, tau_merge must be invoked with a list of unmerged trace files followed by the desired name of the merged trace file or the -
flag to send the output to the standard out. Typically the list can be designated by giving the shared name of the trace files to be merged
followed by desired range of thread or node designators in brackets or the wild card character '*' to encompass variable thread and node
designations in the filename (trace.A.B.C.trc where A, B and C are the node, context and thread numbers respectively). For example
tautrace.*.trc would represent all tracefiles in a given directory while tautrace.[0-5].0.0.trc would represent the tracefiles of nodes 0
through 5 with context 0 and thread 0.
tau_merge will generate the specified merged trace file and an event definition file, tau.edf by default.
The event definition file can be given an alternative name by using the '-m' flag followed by the desired filename. A list of event
definition files to be merged can be designated explicitly by using the '-e' flag followed by a list of unmerged .edf files, specified in
the same manner as the trace file list.
If computational resources are insufficient to merge all trace and event files simultaneously the process may be undertaken hierarchically.
Corresponding subsets of the tracefiles and eventfiles may be merged in sequence to produce a smaller set of files that can then be to
merged into a singular fully merged tracefile and eventfile. E.g. for a 100 node trace, trace sets 1-10, 11-20, ..., 91-100 could be merged
into traces 1a, 2a, ..., 10a. Then 1a-10a could be merged to create a fully merged tracefile.
OPTIONS -e eventfile_list explicitly define the eventfiles to be merged
-m output_eventfile explicitly name the merged eventfile to be created
- send the merged tracefile to the standard out
-a adjust earliest timestamp time to zero
-r do not reassemble long events
-n do not block waiting for new events. By default tau_merge will block and wait for new events to be appended if a tracefile is
incomplete. This command allows offline merging of (potentially) incomplete tracefiles.
EXAMPLES
To merge all TAU tracefiles into app.trc and produce a merged tau.edf eventfile:
tau_merge *.trc app.trc
To merge all eventfiles 0-255 into ev0_255merged.edf and TAU tracefiles for nodes 0-255 into the standard out:
tau_merge -e events.[0-255].edf -m ev0_255merged.edf
tautrace.[0-255].*.trc -
To merge eventfiles 0, 5 and seven info ev057.edf and tau tracefiles for nodes 0, 5 and 7 with context and thread 0 into app.trc:
tau_merge -e events.0.edf events.5.edf events.7.edf -m ev057.edf
tautrace.0.0.0.trc tautrace.5.0.0.trc tautrace.7.0.0.trc app.trc
SEE ALSO
tau_convert
tau2profile
tau2vtf
tau2elg
tau2slog2
12/22/2005 TAU_MERGE(1)