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Full Discussion: modify a format
Top Forums Shell Programming and Scripting modify a format Post 302487283 by kylle345 on Wednesday 12th of January 2011 12:21:03 AM
Old 01-12-2011
modify a format

Hi I have a format that looks like this:

Code:
#TailType       TwoSided
#Scale to target        True
#Target Intensity       100
#Intensities    PM/MM
#Treatment CEL  ./G.CEL
#Control CEL    ./F.CEL
chr1    16      0
chr1    24      0
chr1    32      0.187188
chr1    40      0.14595
chr1    48      0.569928
chr1    56      1.05253
chr1    64      0.773825
chr1    72      0
chr1    80      0.0284669

What I want to do is delete all rows with # then have it so it looks like this:

Code:
chr1    16      24     0
 chr1    24      32     0
 chr1    32      40     0.187188
 chr1    40      48     0.14595
 chr1    48      56     0.569928
 chr1    56      64     1.05253
 chr1    64      72     0.773825
 chr1    72      80     0
 chr1    80      etc.         0.0284669


The file is tab deliminted.

It would be best if this can be written in Perl but awk is fine too.
 

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ppmtosixel(1)						      General Commands Manual						     ppmtosixel(1)

NAME
ppmtosixel - convert a portable pixmap into DEC sixel format SYNOPSIS
ppmtosixel [-raw] [-margin] [ppmfile] DESCRIPTION
Reads a portable pixmap as input. Produces sixel commands (SIX) as output. The output is formatted for color printing, e.g. for a DEC LJ250 color inkjet printer. If RGB values from the PPM file do not have maxval=100, the RGB values are rescaled. A printer control header and a color assignment table begin the SIX file. Image data is written in a compressed format by default. A printer control footer ends the image file. OPTIONS
-raw If specified, each pixel will be explicitly described in the image file. If -raw is not specified, output will default to com- pressed format in which identical adjacent pixels are replaced by "repeat pixel" commands. A raw file is often an order of magni- tude larger than a compressed file and prints much slower. -margin If -margin is not specified, the image will be start at the left margin (of the window, paper, or whatever). If -margin is speci- fied, a 1.5 inch left margin will offset the image. PRINTING
Generally, sixel files must reach the printer unfiltered. Use the lpr -x option or cat filename > /dev/tty0?. BUGS
Upon rescaling, truncation of the least significant bits of RGB values may result in poor color conversion. If the original PPM maxval was greater than 100, rescaling also reduces the image depth. While the actual RGB values from the ppm file are more or less retained, the color palette of the LJ250 may not match the colors on your screen. This seems to be a printer limitation. SEE ALSO
ppm(5) AUTHOR
Copyright (C) 1991 by Rick Vinci. 26 April 1991 ppmtosixel(1)
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