12-23-2010
is there any particular defined patterns of header and other lines in input file, so that I can recognize whether line is a header or a normal line?
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1. Shell Programming and Scripting
Input file:
>TRACK: Position: 1 TYPE: 1 Pos:
SVAVPQRHHPGGTVFREPIIIPAIPRLVPGWNKPIIIGRHAFGDQYRATDRVIPGPGKLE
LVYTPVNGEPETVKVYDFQGGGIAQTQYNTDESIRGFAHASFQMALLKGLPLYMSTKNTI
LKRYDGRFKDIFQEIYESTYQKDFEAKNLWYEHRLIDDMVAQMIKSEGGFVMALKNYDGD
>TRACK: Position: 1 TYPE: 2 Pos:
FAHASFQMALLKGLPLYMS... (8 Replies)
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Input file 1:
>pattern_5
GAATTCGTTCATGTAGGTTGASDASFGDSGRTYRYGHDGSDFGSDGGDSGSDGSDFGSDF
ATTTAATTATGATTCATACGTCATATGTTATTATTCAATCGTATAAAATTATGTGACCTT
SDFSDGSDFKSDAFLKJASLFJASKLFSJAKJFHASJKFHASJKFHASJKFHSJAKFHAW
>pattern_1
AAGTCTTAAGATATCACCGTCGATTAGGTTTATACAGCTTTTGTGTTATTTAAATTTGAC... (10 Replies)
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3. Shell Programming and Scripting
I got two files right now, input file (target file), reference file 1 (query file)
reference file 1 (long list of data)
KOLOPWMOPOPO
ADASDASD
ADSASDASDAD
.
.
target file (one long liner content)
ADASDASDTYUKOKOLOPWMOPOPOOPLUAADSASDASDADPOPOUYADADASDASD
desired output file content
... (1 Reply)
Discussion started by: patrick87
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4. UNIX for Dummies Questions & Answers
Hi,
I have several text files each containing some data as shown below:
File1.txt
>DataHeader
Data...
Data...
File2.txt
>DataHeader
Data...
Data...
etc.
What I want is to change the 'DataHeader' based on the file name. So the output should look like:
File1.txt
>File1
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5. Shell Programming and Scripting
Input file
1 testing 10 20 1
A testing 20 40 1
3 testing 23 232 2
1 testing 10 243 2
.
.
Reference file
1 final
3 used
.
.
Output file (2 Replies)
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6. Shell Programming and Scripting
Input file
1 testing 10 20 1
A testing 20 40 1
3 testing 23 232 2
1 testing 10 243 2
.
.
Reference file
1 final
3 used
.
.
Output file (1 Reply)
Discussion started by: perl_beginner
1 Replies
7. Shell Programming and Scripting
Hi All,
I want to remove the content based on the header information .
Please find the example below.
File1.txt
Name|Last|First|Location|DepId|Depname|DepLoc
naga|rr|tion|hyd|1|wer|opr
Nava|ra|tin|gen|2|wera|opra
I have to search for the DepId and remove the data from the... (5 Replies)
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i have a input of csv file as below but the sequence of column get changed.
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name,age,marks,roll,section
kevin,25,80,456,A
Satch,23,56,789,B
Meena,24,78,H245,C
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Hello,
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I have 2 input files (tab separated):
file1:
make_A 1990 foo bar
make_B 2010 this that
make_C 2004 these those
file2:
make_X 1970 1995 ref_1:43 ref_2:65
make_A 1970 1995 ref_1:4 ref_2:21 ref_3:18
make_A 1980 2002 ref_1:7 ref_2:7 ref_3:0 ... (2 Replies)
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LEARN ABOUT SUSE
xml::parser::style::tree
Parser::Style::Tree(3) User Contributed Perl Documentation Parser::Style::Tree(3)
NAME
XML::Parser::Style::Tree
SYNOPSIS
use XML::Parser;
my $p = XML::Parser->new(Style => 'Tree');
my $tree = $p->parsefile('foo.xml');
DESCRIPTION
This module implements XML::Parser's Tree style parser.
When parsing a document, "parse()" will return a parse tree for the document. Each node in the tree takes the form of a tag, content pair.
Text nodes are represented with a pseudo-tag of "0" and the string that is their content. For elements, the content is an array reference.
The first item in the array is a (possibly empty) hash reference containing attributes. The remainder of the array is a sequence of tag-
content pairs representing the content of the element.
So for example the result of parsing:
<foo><head id="a">Hello <em>there</em></head><bar>Howdy<ref/></bar>do</foo>
would be:
Tag Content
==================================================================
[foo, [{}, head, [{id => "a"}, 0, "Hello ", em, [{}, 0, "there"]],
bar, [ {}, 0, "Howdy", ref, [{}]],
0, "do"
]
]
The root document "foo", has 3 children: a "head" element, a "bar" element and the text "do". After the empty attribute hash, these are
represented in it's contents by 3 tag-content pairs.
perl v5.12.1 2003-07-31 Parser::Style::Tree(3)