Hi,
I have a file such as:
---
>contig00001 length=35524 numreads=2944
gACGCCGCGCGCCGCGGCCAGGGCTGGCCCA
CAGGCCGCGCGGCGTCGGCTGGCTGAG
>contig00002 length=4242 numreads=43423
ATGCCGAAGGTCCGCCTGGGGCTGG
CGCCGGGAGCATGTAGCG
---
I would like to concatenate the lines not starting with ">"... (9 Replies)
Hi everyone,
I have two files (A and B) and want to combine them to one by always taking 10 rows from file A and subsequently 6 lines from file B. This process shall be repeated 40 times (file A = 400 lines; file B = 240 lines).
Does anybody have an idea how to do that using perl, awk or sed?... (6 Replies)
I have following pattern in a file:
00:01:38 UTC
abcd
00:01:48 UTC
00:01:58 UTC
efgh
00:02:08 UTC
00:02:18 UTC
and I need to change something like the following
00:01:38 UTC
abcd
00:01:48 UTC
XXXX
00:01:58 UTC
efgh
00:02:08 UTC
XXXX (6 Replies)
Hi
I have a file like
# vi require.txt
1,BANK,Read blocks that cycle.
yellow
Read blocks.
2,ACCOUNT,Finished
Red
Finished .
3,LOAN, pipe
white
pipe
4,PROFIT,Resolve.
black
Resolve
Am using like
cat require.txt | grep -w ACCOUNTThe output I get is (8 Replies)
I know how to search for a pattern/regular expression in many files that I have in a directory. For example, by doing this:
grep -Ril "News/U.S." .
I can find which files contain the pattern "News/U.S." in a directory.
I am unable to accomplish about how to extend this code so that it can... (1 Reply)
Hi,
I would like to know how to remove lines which has the same pattern as the next line through sed/awk.
Stream 39 (wan stream 7)
Stream 40 (wan stream 8)
WINQ Counter 115955 1 1613
(BYTE) 11204787 163 ... (2 Replies)
In the below file I am trying to grep or similar, all lines where only AF= is less than 0.4.. Thank you :).
grep
grep "AF=" ,+ .4 file
file
12 112036782 . T C 34.0248 PASS ... (3 Replies)
I have a text file with many thousands of lines, a small sample of which looks like this:
InputFile:PS002,003 D -1 5 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 6 6 -1 -1 -1 -1 0 509 0
PS002,003 PSQ 0 1 7 18 1 0 -1 1 1 3 -1 -1 ... (5 Replies)
Discussion started by: jvoot
5 Replies
LEARN ABOUT DEBIAN
paps
PAPS(1) General Commands Manual PAPS(1)NAME
paps - UTF-8 to PostScript converter using Pango
SYNOPSIS
paps [options] files...
DESCRIPTION
paps reads a UTF-8 encoded file and generates a PostScript language rendering of the file. The rendering is done by creating outline curves
through the pango ft2 backend.
OPTIONS
These programs follow the usual GNU command line syntax, with long options starting with two dashes (`-'). A summary of options is
included below.
--landscape
Landscape output. Default is portrait.
--columns=cl
Number of columns output. Default is 1.
Please notice this option isn't related to the terminal length as in a "80 culums terminal".
--font=desc
Set the font description. Default is Monospace 12.
--rtl Do right to left (RTL) layout.
--paper ps
Choose paper size. Known paper sizes are legal, letter and A4. Default is A4.
Postscript points
Each postscript point equals to 1/72 of an inch. 36 points are 1/2 of an inch.
--bottom-margin=bm
Set bottom margin. Default is 36 postscript points.
--top-margin=tm
Set top margin. Default is 36 postscript points.
--left-margin=lm
Set left margin. Default is 36 postscript points.
--right-margin=rm
Set right margin. Default is 36 postscript points.
--gutter-width=gw
Set gutter width. Default is 40 postscript points.
--help Show summary of options.
--header
Draw page header for each page.
--markup
Interpret the text as pango markup.
--lpi Set the lines per inch. This determines the line spacing.
--cpi Set the characters per inch. This is an alternative method of specifying the font size.
--stretch-chars
Indicates that characters should be stretched in the y-direction to fill up their vertical space. This is similar to the texttops
behaviour.
AUTHOR
paps was written by Dov Grobgeld <dov.grobgeld@gmail.com>.
This manual page was written by Lior Kaplan <kaplan@debian.org>, for the Debian project (but may be used by others).
April 17, 2006 PAPS(1)