Login or Register to Ask a Question and Join Our Community

Sponsored Content
Full Discussion: awk to match a numeric range specified by two columns
Top Forums Shell Programming and Scripting awk to match a numeric range specified by two columns Post 302476072 by rdcwayx on Tuesday 30th of November 2010 06:58:09 PM
Old 11-30-2010
Code:
awk 'NR==FNR{a[NR]=$1;s=NR;next} 
     {for (i=1;i<=s;i++) if (a[i]>=$3&&a[i]<=$4) {print a[i] "\t" $0}}' 42MLN.3.bedS2 testRef2

13208   A1BG    -    13208    13284
13208   A1BG    -    13208    13284

This User Gave Thanks to rdcwayx For This Post:
heecha
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

numeric range comparisons

I have two files.And a sort of matrix analysis. Both files have a string followed by two numbers: File 1: A 2 7 B 3 11 C 5 10 ...... File 2: X 1 10 Y 3 5 Z 5 9 What I'd like to do is for each set of numbers in the second file indicate if the first or second number (or both) in... (7 Replies)
Discussion started by: dcfargo
7 Replies

2. Shell Programming and Scripting

match columns using awk

Hi All, I need some help in writing a small script using Awk. My input file has following deatils A,B,C,D 8239359,8239359,8388125,8388125 8239359,8239359,8388125,8388125 7165981,7165981,8363138,8363138 8283830,8283830,8382987,8382987 8209964,8209964,8367098,8367098 ... (8 Replies)
Discussion started by: pistachio
8 Replies

3. Shell Programming and Scripting

match range of different numbers by AWK

if the column1 and 2 in both files has same key (for example "a" and "a1") compare each first key value(a1 of a) of input2 (for example 1-4 or 65-69 not 70-100 or 44-40 etc) with all the values in input1. if the range of first key value in input2 is outof range in input1 values named it as out... (54 Replies)
Discussion started by: repinementer
54 Replies

4. UNIX for Dummies Questions & Answers

How to match 2 columns where one column has data as a range

Hi, I have a query about joining files using data ranges. Example files below - I want to join file1 to file2 with matches where file1 column 1 is equal to file2 column1, and file1 column 2 is within the range of file2 columns 3 and 4. I would like rows which don't match to be printed too. ... (4 Replies)
Discussion started by: auburn
4 Replies

5. UNIX for Dummies Questions & Answers

How to match 2 columns where one column has data as a range - extended

Dear all, there is a nice solution for a text merge where the second file has only variables with a numeric range ( sorry, cannot post URL + thread is closed ). The real world is however more complicated than in the earlier example. file1 A 1 A 2 A 3 B 1 B 2 B 3 B 4 C 1 C 2 C 3 C... (4 Replies)
Discussion started by: underscore
4 Replies

6. Shell Programming and Scripting

Awk numeric range match only one digit?

Hello, I have a text file with lines that look like this: 1974 12 27 -0.72743 -1.0169 2 1.25029 1974 12 28 -0.4958 -0.72926 2 0.881839 1974 12 29 -0.26331 -0.53426 2 0.595623 1974 12 30 7.71432E-02 -0.71887 3 0.723001 1974 12 31 0.187789 -1.07114 3 1.08748 1975 1 1 0.349933 -1.02217... (2 Replies)
Discussion started by: meridionaljet
2 Replies

7. UNIX for Dummies Questions & Answers

Awk match on columns and delete line

Hi, I have a file like this a 1 2 b 2 2 c 2 3 d 4 5 f 5 6 output a 1 2 c 2 3 d 4 5 f 5 6 Basically, I want to delete the whole line if $2 and $3 are the same. Thanks (5 Replies)
Discussion started by: jacobs.smith
5 Replies

8. Shell Programming and Scripting

Match files based on either of the two columns awk

Dear Shell experts, I have 2 files with structure: File 1: ID and count head test_GI_count1.txt 1000094 2 10039307 1 10039641 1 10047177 11 10047359 1 1008555 2 10120302 1 10120672 13 10121776 1 10121865 32 And 2nd file: head Protein_gi_GeneID_symbol.txt protein_gi GeneID... (11 Replies)
Discussion started by: smitra
11 Replies

9. Shell Programming and Scripting

Get range out using sed or awk, only if given pattern match

Input: START OS:: UNIX Release: xxx Version: xxx END START OS:: LINUX Release: xxx Version: xxx END START OS:: Windows Release: xxx Version: xxx ENDHere i am trying to get all the information between START and END, only if i could match OS Type. I can get all the data between the... (3 Replies)
Discussion started by: Dharmaraja
3 Replies

10. Shell Programming and Scripting

awk to print text in field if match and range is met

In the awk below I am trying to match the value in $4 of file1 with the split value from $4 in file2. I store the value of $4 in file1 in A and the split value (using the _ for the split) in array. I then strore the value in $2 as min, the value in $3 as max, and the value in $1 as chr. If A is... (6 Replies)
Discussion started by: cmccabe
6 Replies

LEARN ABOUT MOJAVE

locale::codes::langext5.18

Locale::Codes::LangExt(3pm)				 Perl Programmers Reference Guide			       Locale::Codes::LangExt(3pm)

NAME

       Locale::Codes::LangExt - standard codes for language extension identification

SYNOPSIS

	  use Locale::Codes::LangExt;

	  $lext = code2langext('acm');		       # $lext gets 'Mesopotamian Arabic'
	  $code = langext2code('Mesopotamian Arabic'); # $code gets 'acm'

	  @codes   = all_langext_codes();
	  @names   = all_langext_names();

DESCRIPTION

       The "Locale::Codes::LangExt" module provides access to standard codes used for identifying language extensions, such as those as defined in
       the IANA language registry.

       Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default IANA language
       registry codes will be used.

SUPPORTED CODE SETS

       There are several different code sets you can use for identifying language extensions. A code set may be specified using either a name, or
       a constant that is automatically exported by this module.

       For example, the two are equivalent:

	  $lext = code2langext('acm','alpha');
	  $lext = code2langext('acm',LOCALE_LANGEXT_ALPHA);

       The codesets currently supported are:

       alpha
	   This is the set of three-letter (lowercase) codes from the IANA language registry, such as 'acm' for Mesopotamian Arabic.

	   This is the default code set.

ROUTINES

       code2langext ( CODE [,CODESET] )
       langext2code ( NAME [,CODESET] )
       langext_code2code ( CODE ,CODESET ,CODESET2 )
       all_langext_codes ( [CODESET] )
       all_langext_names ( [CODESET] )
       Locale::Codes::LangExt::rename_langext  ( CODE ,NEW_NAME [,CODESET] )
       Locale::Codes::LangExt::add_langext  ( CODE ,NAME [,CODESET] )
       Locale::Codes::LangExt::delete_langext  ( CODE [,CODESET] )
       Locale::Codes::LangExt::add_langext_alias  ( NAME ,NEW_NAME )
       Locale::Codes::LangExt::delete_langext_alias  ( NAME )
       Locale::Codes::LangExt::rename_langext_code  ( CODE ,NEW_CODE [,CODESET] )
       Locale::Codes::LangExt::add_langext_code_alias  ( CODE ,NEW_CODE [,CODESET] )
       Locale::Codes::LangExt::delete_langext_code_alias  ( CODE [,CODESET] )
	   These routines are all documented in the Locale::Codes::API man page.

SEE ALSO

       Locale::Codes
	   The Locale-Codes distribution.

       Locale::Codes::API
	   The list of functions supported by this module.

       http://www.iana.org/assignments/language-subtag-registry
	   The IANA language subtag registry.

AUTHOR

       See Locale::Codes for full author history.

       Currently maintained by Sullivan Beck (sbeck@cpan.org).

COPYRIGHT

	  Copyright (c) 2011-2013 Sullivan Beck

       This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.

perl v5.18.2							    2013-11-04					       Locale::Codes::LangExt(3pm)
All times are GMT -4. The time now is 11:17 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy