Sponsored Content
Top Forums Shell Programming and Scripting awk to match a numeric range specified by two columns Post 302476072 by rdcwayx on Tuesday 30th of November 2010 06:58:09 PM
Old 11-30-2010
Code:
awk 'NR==FNR{a[NR]=$1;s=NR;next} 
     {for (i=1;i<=s;i++) if (a[i]>=$3&&a[i]<=$4) {print a[i] "\t" $0}}' 42MLN.3.bedS2 testRef2

13208   A1BG    -    13208    13284
13208   A1BG    -    13208    13284

This User Gave Thanks to rdcwayx For This Post:
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

numeric range comparisons

I have two files.And a sort of matrix analysis. Both files have a string followed by two numbers: File 1: A 2 7 B 3 11 C 5 10 ...... File 2: X 1 10 Y 3 5 Z 5 9 What I'd like to do is for each set of numbers in the second file indicate if the first or second number (or both) in... (7 Replies)
Discussion started by: dcfargo
7 Replies

2. Shell Programming and Scripting

match columns using awk

Hi All, I need some help in writing a small script using Awk. My input file has following deatils A,B,C,D 8239359,8239359,8388125,8388125 8239359,8239359,8388125,8388125 7165981,7165981,8363138,8363138 8283830,8283830,8382987,8382987 8209964,8209964,8367098,8367098 ... (8 Replies)
Discussion started by: pistachio
8 Replies

3. Shell Programming and Scripting

match range of different numbers by AWK

if the column1 and 2 in both files has same key (for example "a" and "a1") compare each first key value(a1 of a) of input2 (for example 1-4 or 65-69 not 70-100 or 44-40 etc) with all the values in input1. if the range of first key value in input2 is outof range in input1 values named it as out... (54 Replies)
Discussion started by: repinementer
54 Replies

4. UNIX for Dummies Questions & Answers

How to match 2 columns where one column has data as a range

Hi, I have a query about joining files using data ranges. Example files below - I want to join file1 to file2 with matches where file1 column 1 is equal to file2 column1, and file1 column 2 is within the range of file2 columns 3 and 4. I would like rows which don't match to be printed too. ... (4 Replies)
Discussion started by: auburn
4 Replies

5. UNIX for Dummies Questions & Answers

How to match 2 columns where one column has data as a range - extended

Dear all, there is a nice solution for a text merge where the second file has only variables with a numeric range ( sorry, cannot post URL + thread is closed ). The real world is however more complicated than in the earlier example. file1 A 1 A 2 A 3 B 1 B 2 B 3 B 4 C 1 C 2 C 3 C... (4 Replies)
Discussion started by: underscore
4 Replies

6. Shell Programming and Scripting

Awk numeric range match only one digit?

Hello, I have a text file with lines that look like this: 1974 12 27 -0.72743 -1.0169 2 1.25029 1974 12 28 -0.4958 -0.72926 2 0.881839 1974 12 29 -0.26331 -0.53426 2 0.595623 1974 12 30 7.71432E-02 -0.71887 3 0.723001 1974 12 31 0.187789 -1.07114 3 1.08748 1975 1 1 0.349933 -1.02217... (2 Replies)
Discussion started by: meridionaljet
2 Replies

7. UNIX for Dummies Questions & Answers

Awk match on columns and delete line

Hi, I have a file like this a 1 2 b 2 2 c 2 3 d 4 5 f 5 6 output a 1 2 c 2 3 d 4 5 f 5 6 Basically, I want to delete the whole line if $2 and $3 are the same. Thanks (5 Replies)
Discussion started by: jacobs.smith
5 Replies

8. Shell Programming and Scripting

Match files based on either of the two columns awk

Dear Shell experts, I have 2 files with structure: File 1: ID and count head test_GI_count1.txt 1000094 2 10039307 1 10039641 1 10047177 11 10047359 1 1008555 2 10120302 1 10120672 13 10121776 1 10121865 32 And 2nd file: head Protein_gi_GeneID_symbol.txt protein_gi GeneID... (11 Replies)
Discussion started by: smitra
11 Replies

9. Shell Programming and Scripting

Get range out using sed or awk, only if given pattern match

Input: START OS:: UNIX Release: xxx Version: xxx END START OS:: LINUX Release: xxx Version: xxx END START OS:: Windows Release: xxx Version: xxx ENDHere i am trying to get all the information between START and END, only if i could match OS Type. I can get all the data between the... (3 Replies)
Discussion started by: Dharmaraja
3 Replies

10. Shell Programming and Scripting

awk to print text in field if match and range is met

In the awk below I am trying to match the value in $4 of file1 with the split value from $4 in file2. I store the value of $4 in file1 in A and the split value (using the _ for the split) in array. I then strore the value in $2 as min, the value in $3 as max, and the value in $1 as chr. If A is... (6 Replies)
Discussion started by: cmccabe
6 Replies
Locale::Codes::LangFam(3pm)				 Perl Programmers Reference Guide			       Locale::Codes::LangFam(3pm)

NAME
Locale::Codes::LangFam - standard codes for language extension identification SYNOPSIS
use Locale::Codes::LangFam; $lext = code2langfam('apa'); # $lext gets 'Apache languages' $code = langfam2code('Apache languages'); # $code gets 'apa' @codes = all_langfam_codes(); @names = all_langfam_names(); DESCRIPTION
The "Locale::Codes::LangFam" module provides access to standard codes used for identifying language families, such as those as defined in ISO 639-5. Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default ISO 639-5 language family codes will be used. SUPPORTED CODE SETS
There are several different code sets you can use for identifying language families. A code set may be specified using either a name, or a constant that is automatically exported by this module. For example, the two are equivalent: $lext = code2langfam('apa','alpha'); $lext = code2langfam('apa',LOCALE_LANGFAM_ALPHA); The codesets currently supported are: alpha This is the set of three-letter (lowercase) codes from ISO 639-5 such as 'apa' for Apache languages. This is the default code set. ROUTINES
code2langfam ( CODE [,CODESET] ) langfam2code ( NAME [,CODESET] ) langfam_code2code ( CODE ,CODESET ,CODESET2 ) all_langfam_codes ( [CODESET] ) all_langfam_names ( [CODESET] ) Locale::Codes::LangFam::rename_langfam ( CODE ,NEW_NAME [,CODESET] ) Locale::Codes::LangFam::add_langfam ( CODE ,NAME [,CODESET] ) Locale::Codes::LangFam::delete_langfam ( CODE [,CODESET] ) Locale::Codes::LangFam::add_langfam_alias ( NAME ,NEW_NAME ) Locale::Codes::LangFam::delete_langfam_alias ( NAME ) Locale::Codes::LangFam::rename_langfam_code ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangFam::add_langfam_code_alias ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangFam::delete_langfam_code_alias ( CODE [,CODESET] ) These routines are all documented in the Locale::Codes::API man page. SEE ALSO
Locale::Codes The Locale-Codes distribution. Locale::Codes::API The list of functions supported by this module. http://www.loc.gov/standards/iso639-5/id.php ISO 639-5 . AUTHOR
See Locale::Codes for full author history. Currently maintained by Sullivan Beck (sbeck@cpan.org). COPYRIGHT
Copyright (c) 2011-2013 Sullivan Beck This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself. perl v5.18.2 2013-11-04 Locale::Codes::LangFam(3pm)
All times are GMT -4. The time now is 06:17 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy