I have a file that has data in the following manner,
This is consistent for all the entries in the file. I want to delete the 'tt_' and '.dat' from each line. Could anyone please guide me how to do this using awk or sed?
Thanks.
Last edited by Scott; 11-15-2010 at 05:09 PM..
Reason: Code tags please...
I'm a biologist trying to analyse some data and I'll appreciate some help with the following problem. I have a column of characters which I'll like to delete the duplicated characters in each line and report only the unique one.No sorting should be done. E.g.
The original data:
GTG
CTC
CTC... (5 Replies)
Hi,
I have a file with about 25 colums separated with '~', but few of the lines have extra tabs ('^') and new line characters ('$'). Is there a way I can delete those characters if they are anywhere before the 25th column in a line?
example:
CLUB000650;12345678;0087788667;NOOP MEMBER ... (4 Replies)
hi,
./R1_970330_210505.sard
./R1_970403_223412.sard
./R1_970626_115235.sard
./R1_970626_214344.sard
./R1_970716_234214.sard
...
...
...
for these strings, i wanna remove the ./ for each line
how can i do that?
i know it could possibly be done by sed, but i really have not idea how... (4 Replies)
Hello,
I have file that looks like this :
765327564:line1
94:line2
7865:line3
.....
765322:linen
I want to cut all the digits from the beginning of each line up to ":" character and to have everything like this :
line1
line2
line3
.....
linen
P.S : content of line1 ...... (8 Replies)
Hi,
I have a text file with some lines like this:
/MEDIA/DISK1/23568742.MOV
/MEDIA/DISK1/87456321.AVI
/MEDIA/DISK2/PART1/45753131.AVI
/IMPORT/44452.WAV
...
I want to remove the last 12 characters in each line that it ends "AVI". Should look like this:
/MEDIA/DISK1/23568742.MOV... (12 Replies)
Hi,
I have a large text file with the following format:
>gi|347545744|gb|JN204951.1| Dismorphia spio voucher 5
ATCAAATTCCTTCCTCTCCTTAAA
>gi|17544664774|gb|WN204922.32| Rodapara nigens gene region
CCGGGCAAATTCCTTCCTCTCCTTAAA
>gi|555466400|gb|SG255122.8| Bombyx mandariana genbank 3... (1 Reply)
Ive been trying to google and tried sed and awk. BUt still getting no exact formula.
I would like to know how to parse this at:
From:
Compute Machin Appliance 3.2.9.10000 123456
To:
Compute Machin Appliance 3.2.9.123456 (5 Replies)
Could you tell me the possibilities of the reason to get the Mismatched free() / delete / delete .
I unable to see the line no in the valgrind report. it displays the function name. with that function name, I am not able to find where exactly the issue is there.I am getting the Mismatched free()... (3 Replies)
here's what im trying to do.
i have a file containing lines similar to this:
data.txt:
1hsRmRsbHRiSFZNTTA1dlEyMWFkbU5wUW5CSlIyeDFTVU5SYjJOSFRuWmpia0ZuWXpKV2FHTnRU
1lKUnpWMldrZFZaMG95V25oYQpSelEyWTBka2QyRklhSHBrUjA1b1kwUkJkd3BOVXpWM1lVaG5k... (5 Replies)
My sed is not working on deleting the entire special characters and leaving what is necessary.grep connections_per a|sed -e 's/\<\!\-\-//g'
INPUT:
<!-- <connections_per_instance>1</connections_per_instance> -->
<method>HALF</method>
<!--... (10 Replies)
Discussion started by: kenshinhimura
10 Replies
LEARN ABOUT LINUX
unknown
UNKNOWN(1) General Commands Manual UNKNOWN(1)NAME
unknown - identify possible genotypes for unknowns
SYNOPSIS
A program to rapidly identify which genotypes are possible for individuals typed as unknowns in the input pedigree.
unknown [ -cl ]
DESCRIPTION
unknown infers possible genotypes and mating combinations for parents with unknown genotypes for ilink(1), mlink(1) and linkmap(1).
OPTIONS -c Use conditional allele frequencies.
-l Choose a good set of loop breakers automatically.
RETURN VALUE
0 Successful completion
ERRORS
10 File not found
255 Failure
EXAMPLES
Normally, unknown(1) is run immediately prior to its sister programs, ilink(1), mlink(1) and linkmap(1), like this:
unknown
mlink
FILES unknown(1) reads the two files pedfile.dat and datafile.dat as its own input and produces various temporary files that are used as input to
the next program. These temporary files are ipedfile.dat, upedfile.dat, speedfile.dat and newspeedfile.dat.
NOTES unknown(1) is part of the FASTLINK package, which is a re-implementation of the LINKAGE suite of computer tools that help investigate
genetic linkage as first proposed G.M. Lathrop, J.M. Lalouel, C. Julier, and J. Ott.
AUTHORS
Dylan Cooper, Alejandro Schaffer, and Tony Schurtz based on work originally by Jurg Ott, Ph.D, et. al.
This manual page was written by Elizabeth Barham <lizzy@soggytrousers.net> for the Debian GNU/Linux system (but may be used by others).
WORD-WIDE-WEB
http://www.ncbi.nlm.nih.gov/CBBResearch/Schaffer/fastlink.html
SEE ALSO ilink(1), linkmap(1), lodscore(1), mlink(1).
April 15, 2003 UNKNOWN(1)