10-20-2010
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10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hey,
I have two files that have exactly the same format. They are both tab-delimited and contain 12 columns. However the # of rows vary. What I want to do is match columns # 5,6 and 7 between the two files. If they do match exactly (based on numbers) then I want the whole row from file 2 to... (1 Reply)
Discussion started by: phil_heath
1 Replies
2. UNIX for Dummies Questions & Answers
Hi to all,
I have two separated files:
FILE1
"V1" "V2" "V3"
Mary James Nicole
Robert Francisco Sophie
Nancy Antony Matt
Josephine Louise Rose
Mark Simon
Charles
FILE2
"V1" "V2" "V3"... (2 Replies)
Discussion started by: eleonoral
2 Replies
3. Shell Programming and Scripting
Hello,
I have two files as following:
#bin chrom chromStart chromEnd name score strand observed
585 chr2 29442 29443 rs4637157 0 + C/T
585 chr2 33011 33012 rs13423995 0 + A/G
585 chr2 34502 34503 rs13386087 0 + ... (2 Replies)
Discussion started by: Homa
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4. Shell Programming and Scripting
Hi!
I need to merge two files when col1 (x:x:x) matching and adds second column from file1.txt.
# cat 1.txt
aaa;a12
bbb;b13
ccc;c33
ddd;d55
eee;e11
# cat 2.txt
bbb;b55;34444;d55
aaa;a15;35666;a44
I try with this awk and I get succesfully first column from 1.txt:
# awk -F";"... (2 Replies)
Discussion started by: fhluque
2 Replies
5. Shell Programming and Scripting
Hi,
I need to join two files together with one common value in a column. I think I can use awk or join or a combination but I can't quite get it.
Basically my data looks like this, with the TICKER columns matching up in each file
File1
TICKER,column 1, column, 2, column, 3, column 4
... (6 Replies)
Discussion started by: unkleruckus
6 Replies
6. Shell Programming and Scripting
Hello Help,
2356798 7689867 999 000
123678 20385907 9797 666
17978975 87468976 968978 98798
I am trying to have out put which actually look for the third column value of 9797 and then it insert line there after with first, second column value exactly as the previous line and replace the third... (3 Replies)
Discussion started by: Indra2011
3 Replies
7. Shell Programming and Scripting
Given this file (I separated them in block to make my explanation clearer):
92157768877;Sof_deme_Fort_Email_am_%yyyy%%mm%%dd%;EMAIL;20/02/2015;1;0;0
92157768877;Sof_trav_Fort_Email_am_%yyyy%%mm%%dd%;EMAIL;20/02/2015;1;0;0
91231838895;Sof_deme_faible_Email_am;EMAIL;26/01/2015;1 0;0... (1 Reply)
Discussion started by: Andy_K
1 Replies
8. Shell Programming and Scripting
I know I'm not the first one asking this but my code still does not work:
File 1: gi|1283| tRNAscan exon 87020 88058 . - . transcript_id "Parent=tRNA-Tyr5.r01";
gi|3283| tRNAscan exon 97020 97058 . + . transcript_id "Parent=tRNA-Tyr6.r01";
gi|4283| rRNAscan exon 197020 197058 . - . transcript_id... (5 Replies)
Discussion started by: 0sMoses
5 Replies
9. Shell Programming and Scripting
Hi All,
I am looking to join two files where column 1 of file A matches with column 1 of file B and column 5 of files A matches with column 2 of file B. After joining the files based on above condition, out should contain entire line of file A and column 3, 4 and 5 of file B.
Here is sample... (8 Replies)
Discussion started by: angshuman
8 Replies
10. Shell Programming and Scripting
I am using awk to match columns and output based on those matches. For some reason it is not printing matching columns, am I missing something?
Operating system - windows with cygwin.
Command that I am using:
sed 's/]*,]*/,/g' $tempdir/file1 > $tempdir/file1.$$ && awk -F, 'FNR==NR{f2=$2... (7 Replies)
Discussion started by: dis0wned
7 Replies
GFRM(1) GFRM(1)
NAME
gfrm - remove Gfarm files, directories, or file replicas
SYNOPSIS
gfrm [ -frRnqv ] [ -I file-section ] [ -h filesystem-node ] [ -D domain-name ] [ -H hostfile ] [ -N num-of-replicas ] [ -j num-of-threads ]
gfarm-URL ...
DESCRIPTION
gfrm removes each specified file. It does not remove directories unless the -r or -R option is specified. '.' or '..' cannot be removed.
When the -I option is specified, gfrm removes the specified file section. File section is an architecture name for executable files, or a
fragment index for a regular file.
With the -h, -D, or -H option, gfrm removes file replicas of each specified file or file section on the specified filesystem node(s). All
file replicas of a file cannot be removed, unless the -f option is specified.
OPTIONS
-f Even when all file replicas are specified by the -h, -D, or -H option, forcibly deletes all the file replica. In this case, the
specified file will be deleted.
-j num-of-threads
Specifies the number of threads to delete file replicas simultaneously. This option is only available when gfrm is compiled by an
OpenMP C compiler.
-n Prints file names to be deleted, but does not delete them.
-q Does not print any verbose message.
-r, -R Removes all entries under the directories specified by the command-line argument recursively.
-v Prints verbose messages.
-h filesystem-node
Specifies a filesystem node from which file replicas will be removed. With the -I option, a file replica of the specified file sec-
tion will be removed.
-D domain-name
Specifies a domain name of filesystem nodes on which file replicas will be removed. With the -I option, a file replica of the spec-
ified file section will be removed.
-H hostfile
Specifies a hostfile that lists filesystem nodes on which file replicas will be removed. With the -I option, a file replica of the
specified file section will be removed.
if ``-'' is specified, standard input is used to read the host list.
-I file-section
Specifies the file section to be removed. File section is an architecture name, such as sparc-sun-solaris8, for executable files,
and a fragment index for regular files.
-N num-of-replicas
Specifies the maximum number of file replicas. If files has more number of file replicas than specified, reduce the number of file
replicas.
-? Displays a list of command options.
Gfarm 13 November 2006 GFRM(1)