Sponsored Content
Top Forums Shell Programming and Scripting Removing a portion of data in a file Post 302453821 by alister on Thursday 16th of September 2010 01:09:21 PM
Old 09-16-2010
Code:
for f in *.fasta; do
    printf '/^>/;/^>/-d\nw\nq\n' | ed -s "$f"
done

These 2 Users Gave Thanks to alister For This Post:
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

removing a portion of a code from a file

Hi everyone, I need to know how to remove a chunk of codes from a file for instance i have couple of lines which are commented out of the file and i need to remove that block. here is the example --#------------------------------------------------------------------ --# File name= ... (5 Replies)
Discussion started by: ROOZ
5 Replies

2. Shell Programming and Scripting

Extracting a portion of a data file with identifier

Hi, I do have a TAB delimted text file with the following format. 1 (- identifier of each group. this text is not present in the file only number) 1 3 4 65 56 WERTF 2 3 4 56 56 GHTYHU 3 3 5 64 23 VMFKLG 2 1 3 4 65 56 DGTEYDH 2 3 4 56 56 FJJJCKC 3 3 5 64 23 FNNNCHD 3 1 3 4 65 56 JDHJDH... (9 Replies)
Discussion started by: Lucky Ali
9 Replies

3. Shell Programming and Scripting

SFTP to server, pulling data and removing the data

Hi all, I have the following script, but are not too sure about the syntax to complete the script. In essence, the script must connect to a SFTP server at a client site with username and password located in a file on my server. Then change to the appropriate directory. Pull the data to the... (1 Reply)
Discussion started by: codenjanod
1 Replies

4. Shell Programming and Scripting

Extracting a portion of data from a very large tab delimited text file

Hi All I wanted to know how to effectively delete some columns in a large tab delimited file. I have a file that contains 5 columns and almost 100,000 rows 3456 f g t t 3456 g h 456 f h 4567 f g h z 345 f g 567 h j k lThis is a very large data file and tab delimited. I need... (2 Replies)
Discussion started by: Lucky Ali
2 Replies

5. Shell Programming and Scripting

parsing a portion of Data from a text file

Hi All, I need some help to effectively parse out a subset of results from a big results file. Below is an example of the text file. Each block that I need to parse starts with "Output of GENE for sequence file 100.fasta" (next block starts with another number). I have given the portion of... (8 Replies)
Discussion started by: Lucky Ali
8 Replies

6. Shell Programming and Scripting

Extract portion of data

Hi Gurus, I need some help in extracting some of these information and massage it into the desired output as shown below. I need to extract the last row with the header in below sample which is usually the most recent date, for example: 2012-06-01 142356 mb 519 -219406 mb 1 ... (9 Replies)
Discussion started by: superHonda123
9 Replies

7. UNIX for Advanced & Expert Users

Removing portion of file name

Hi , I am getting file name like ABC_DATA_CUSTIOMERS_20120617.dat ABC_DATA_PRODUCTS_20120617.dat Need to convert CUSTIOMERS.dat PRODUCTS.dat Help me how to do this. (7 Replies)
Discussion started by: reach_malu
7 Replies

8. Shell Programming and Scripting

Unix Scripting : Sort a Portion of a File and not the complete file

Need to sort a portion of a file in a Alphabetical Order. Example : The user adam is not sorted and the user should get sorted. I don't want the complete file to get sorted. Currently All_users.txt contains the following lines. ############## # ARS USERS ############## mike, Mike... (6 Replies)
Discussion started by: evrurs
6 Replies

9. Shell Programming and Scripting

Removing inline binary data from txt file

I am trying to parse a file but the filehas binary data inline mixed with text fields. I tried the binutils strings function , it get the binary data out but put the char following the binary data in a new line . input file app_id:1936 pgm_num:0 branch:TBNY ord_num:0500012(–QMK) deal_num:0... (12 Replies)
Discussion started by: tasmac
12 Replies

10. Shell Programming and Scripting

Archiving or removing few data from log file in real time

Hi, I have a log file that gets updated every second. Currently the size has grown to 20+ GB. I need to have a command/script, that will try to get the actual size of the file and will remove 50% of the data that are in the log file. I don't mind removing the data as the size has grown to huge... (8 Replies)
Discussion started by: Souvik Patra
8 Replies
Locale::Codes::LangVar(3)				User Contributed Perl Documentation				 Locale::Codes::LangVar(3)

NAME
Locale::Codes::LangVar - standard codes for language variation identification SYNOPSIS
use Locale::Codes::LangVar; $lvar = code2langvar('acm'); # $lvar gets 'Mesopotamian Arabic' $code = langvar2code('Mesopotamian Arabic'); # $code gets 'acm' @codes = all_langvar_codes(); @names = all_langvar_names(); DESCRIPTION
The "Locale::Codes::LangVar" module provides access to standard codes used for identifying language variations, such as those as defined in the IANA language registry. Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default IANA language registry codes will be used. SUPPORTED CODE SETS
There are several different code sets you can use for identifying language variations. A code set may be specified using either a name, or a constant that is automatically exported by this module. For example, the two are equivalent: $lvar = code2langvar('arevela','alpha'); $lvar = code2langvar('arevela',LOCALE_LANGVAR_ALPHA); The codesets currently supported are: alpha This is the set of alphanumeric codes from the IANA language registry, such as 'arevela' for Eastern Armenian. This code set is identified with the symbol "LOCALE_LANGVAR_ALPHA". This is the default code set. ROUTINES
code2langvar ( CODE [,CODESET] ) langvar2code ( NAME [,CODESET] ) langvar_code2code ( CODE ,CODESET ,CODESET2 ) all_langvar_codes ( [CODESET] ) all_langvar_names ( [CODESET] ) Locale::Codes::LangVar::rename_langvar ( CODE ,NEW_NAME [,CODESET] ) Locale::Codes::LangVar::add_langvar ( CODE ,NAME [,CODESET] ) Locale::Codes::LangVar::delete_langvar ( CODE [,CODESET] ) Locale::Codes::LangVar::add_langvar_alias ( NAME ,NEW_NAME ) Locale::Codes::LangVar::delete_langvar_alias ( NAME ) Locale::Codes::LangVar::rename_langvar_code ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangVar::add_langvar_code_alias ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangVar::delete_langvar_code_alias ( CODE [,CODESET] ) These routines are all documented in the Locale::Codes::API man page. SEE ALSO
Locale::Codes The Locale-Codes distribution. Locale::Codes::API The list of functions supported by this module. http://www.iana.org/assignments/language-subtag-registry The IANA language subtag registry. AUTHOR
See Locale::Codes for full author history. Currently maintained by Sullivan Beck (sbeck@cpan.org). COPYRIGHT
Copyright (c) 2011-2013 Sullivan Beck This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself. perl v5.16.3 2013-04-12 Locale::Codes::LangVar(3)
All times are GMT -4. The time now is 01:46 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy