09-06-2010
Here...
Dear Corona688, you confuse binary tree algorithm for file seeking with an actual allocation i-nodes on physical drive. The gaps that left after removal of files and filled with parts of other files cause the fragmentation. When file open for reading, it goes through the chain and as parts of the file allocated in the areas that are not compactly located, the drive has to performs extra spins in order for perpendicularly moving heads to be on-time for reading/writing in the area. Along with disks' interleaving functionality it makes drive access very slow. That is exactly what fragmentation is. "shake" is one of many options available, again it is not universal and it is not capable of performing defragnetation on all kinds of file system used in UNIX land. "dump"-"restore" is a standard universal way of dealing with the problem, for enterprise level systems, at least for last 20 years.
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NTFSFIX(8) System Manager's Manual NTFSFIX(8)
NAME
ntfsfix - fix common errors and force Windows to check NTFS
SYNOPSIS
ntfsfix [options] device
DESCRIPTION
ntfsfix is a utility that fixes some common NTFS problems. ntfsfix is NOT a Linux version of chkdsk. It only repairs some fundamental NTFS
inconsistencies, resets the NTFS journal file and schedules an NTFS consistency check for the first boot into Windows.
You may run ntfsfix on an NTFS volume if you think it was damaged by Windows or some other way and it can't be mounted.
OPTIONS
Below is a summary of all the options that ntfsfix accepts. Nearly all options have two equivalent names. The short name is preceded by -
and the long name is preceded by --. Any single letter options, that don't take an argument, can be combined into a single command, e.g.
-fv is equivalent to -f -v. Long named options can be abbreviated to any unique prefix of their name.
-h, --help
Show a list of options with a brief description of each one.
-V, --version
Show the version number, copyright and license
BUGS
There are no known problems with ntfsfix. If you find a bug please send an email describing the problem to the development team:
linux-ntfs-dev@lists.sourceforge.net
AUTHORS
ntfsfix was written by Anton Altaparmakov, with contributions from Szabolcs Szakacsits.
AVAILABILITY
ntfsfix is part of the ntfsprogs package and is available from:
http://www.linux-ntfs.org/content/view/19/37
The manual pages are available online at:
http://man.linux-ntfs.org/
SEE ALSO
mkntfs(8), ntfsprogs(8)
ntfsprogs 1.13.1 January 2006 NTFSFIX(8)