Hi,
I have one situation. I have some 6-7 no. of files in one directory & I have to extract all the lines which exist in all these files. means I need to extract all common lines from all these files & put them in a separate file.
Please help. I know it could be done with the help of... (11 Replies)
Hi! I have a large set of pairs of text files (each pair in their own subdirectory) and each pair shares head/tail (a couple of first and last lines) but differs in the middle part. I need to delete the heads/tails and keep only the middle portions in which they differ. The lengths of heads/tails... (1 Reply)
Hello guys,
I need a script to get the common lines from two files with a criteria that if the first two columns match then I keep the maximum value of the 3rd column.(tab separated columns)
Sample input:
file1:
111 222 0.1
333 444 0.5
555 666 0.4
file 2:
111 222 0.7
555 666... (5 Replies)
Hello everyone
A few years Ago the user radoulov posted a fancy solution for a problem, which was about finding common lines (gene variation names) between multiple samples (files). The code was:
awk 'END {
for (R in rec) {
n = split(rec, t, "/")
if (n > 1)
dup = dup ?... (5 Replies)
Thanks everyone. I got that problem solved.
I require one more help here. (Yes, UNIX definitely seems to be fun and useful, and I WILL eventually learn it for myself. But I am now on a different project and don't really have time to go through all the basics. So, I will really appreciate some... (6 Replies)
Dear All,
I have 2 files. If field 1, 2, 4 and 5 matches in both file1 and file2, I want to print the whole line of file1 and file2 one after another in my output file.
File1:
sc2/80 20 . A T 86 F=5;U=4
sc2/60 55 . G T ... (1 Reply)
Hi! I would like to comm -12 with one file and with all of the files in another folder that has a 100 files or more (that file is not in that folder) to find common text lines. I would like to have each case that they have common lines to be written to a different output file and the names of the... (6 Replies)
Could it be possible to find common lines between all of the files in one folder? Just like comm -12 . So all of the files two at a time. I would like all of the outcomes to be written to a different files, and the file names could be simply numbers - 1 , 2 , 3 etc. All of the file names contain... (19 Replies)
Hi,
A beginner one.
my input.tab (tab-separated):
h1 h2 h3 h4 h5
item1 grpA 2 3 customer1
item2 grpB 4 6 customer1
item3 grpA 5 9 customer1
item4 grpA 0 0 customer2
item5 grpA 9 1 customer2
objective:
output a file for each customer ($5) with the item number ($1) only if $2 matches... (2 Replies)
Discussion started by: beca123456
2 Replies
LEARN ABOUT DEBIAN
getcol
getcol(1) General Commands Manual getcol(1)Name
getcol - Extract specified columns from an ASCII table file
Synopsis
getcol [-amv][-n num][-r lines][-s num] filename [column number range]
Description
Extract specified columns from an ASCII table file
Options
filename
Name of a ASCII table file. At least one of these must be present for any values to be printed. If it is stdin or STDIN, an ASCII
table is expected as standard input. If there is no input file, standard input is assumed.
@filename
Name of a file containing a list of ASCII table files. If this is present, any other file names on the command line will be
ignored.
field range
Print value of these columns for the number of lines of the table specified by the -n argument after the skippiing the number of
lines specified by the -s argument. A value of 0 causes the entire input line to be printed.
-a Sum all numeric columns selected, printing the sum on the line following the result. Columns with no sum are filled with ___.
(Added in version 2.6.9)
-b Input is bar-separate table file
-c Add count of number of lines in each column at end
-d <number>
Number of decimal places in f.p. output
-e Compute medians of selected columns
-f Print range of values in selected columns
-h Print Starbase tab table header
-i Input is tab-separate table file
-k Print number of columns on first line
-l <number>
Number of lines to add to each line
-m Compute the means of all numeric columns selected, printing the mean on the line following the result (or the line following the sum
if -a is used). Columns with no mean are filled with ___. (Added in version 2.6.9)
-n num Print selected columns for this many lines. If not specified, all lines will be read after the number of lines specified by -s have
been skipped.
-o OR conditions insted of ANDing them
-p Print only sum, mmean, sigma, median, or range, not entries
-r @listfile
-r line range Print columns from the lines specified as either the first nonzero number on each line of the file listfile or the
comma- and hyphen- delimitied range; i.e. 1-5,10-12 will print values from lines 1, 2, 3, 4, 5, 10, 11, and 12. (added in version
2.6.12)
-s num Skip this many line before starting to print values. If not specified, no lines will be skipped.
-t Starbase (tab-separated) table output
-v Print more information about process.
Web Page
http://tdc-www.harvard.edu/software/wcstools/getcol.html
Author
Doug Mink, SAO (dmink@cfa.harvard.edu)
8 November 2001 WCSTools getcol(1)